Gene Mboo_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1270 
Symbol 
ID5410290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1294839 
End bp1295156 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content56% 
IMG OID640868498 
Productzinc finger SWIM domain-containing protein 
Protein accessionYP_001404431 
Protein GI154150813 
COG category[S] Function unknown 
COG ID[COG5431] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.141057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC CCTGGCAGAG GATCGGTGAG AAAAAGTGCC TTGACGAGGA GAGCCGGGCA 
GCGCTTATCG AAATGTACGG ATCACGGGGA AAGAAAGCGC TGGATGCCGT TACGCAGGGC
CTGGTGAAAA AATATCGCGA TTTTTTTGTA GTCACCGGGT CTTCCGGCGA TCATGTGGTA
AGCGAGGGCG TCTGCACGTG CCGGGATTTT GCATTCCGGC AGAAGCCCTG CGGGCACATC
CTTGCGGTCA GGATTGCGGA GCTGACCGGG GCATACGAGA CCGTTGACGC ATGGTACCAG
GAGTCCTGGA AAAAGTAA
 
Protein sequence
MIDPWQRIGE KKCLDEESRA ALIEMYGSRG KKALDAVTQG LVKKYRDFFV VTGSSGDHVV 
SEGVCTCRDF AFRQKPCGHI LAVRIAELTG AYETVDAWYQ ESWKK