Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1250 |
Symbol | |
ID | 5412079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1272844 |
End bp | 1274523 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640868478 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001404411 |
Protein GI | 154150793 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGGG AAAGCGAACA GGAACGGATC CGGGAGTTAT TAAAGGGCAA TCCCAAGGGC CTGACTATTG AGGAAGTCTC AAAGAAGCTT GGGCTTAACA GGTCCACCGC AGCAAAATAC CTGACCTCCC TGGTAGTCTC CGGCCAGGCG GATATGCGGA CGCTGGGGCC GGCAAAGCTC TTCTACCTCA CCCAGCGTCT CCCGATGACC AACCTGCTCT CGCTCGCATC CGATCTTATC CTCATTCTTG ACCAGGATCT TTTTATCCAG GAGGCAAACA ATCCGTTCCT CTCCTTTTTC CACCAGACCA AGGCGGCACT CAAAGGAGTA CGGATAGAGC ACTCCCCGCT TGCATCGTAT TTTGGCGGTG AGCACCTTGC AGCCCTCACA AAAGCTTTGG AAGGAGAGGA GACTGCATTT GAGACCCGGT TTGAGAACGA GGGAAGTATC CGGTATTTCC GGACAAAATG TATTCCCCTT GTCTTTGAGG AAGGTGGGAG GGCGGCAGGT ATCATCTTTG AGGATATCAC AGAGATGAAG CAATACCAGC ACGATCTGGA AGAACAGGTA CGGCTTCGGA CTGCGGAACT GGAGCAGACC AATACTGCTT TAAAAAAAGA GATCGCGGAG CACACCCGGG CAGAAGAGTC CCTGGCCAGG AACGAGCGTC GGCTTCGCCG TGCTGAGGGC GTGGCGCATT TTGGCAACTG GGAATATTAC CATGAGGAAA AGAGGGTCTT TGTGTCGGAG GGCATGCGAA CCCTGTACGG CATTTCCGGC AATGAACCAA CCCTCGACGA ACTCGGGCAG ATCACGCTTC CTGAATATCG GCCCGTTCTT GGAGCTGCCG TCAGGGACCT GATCCGGGAG AATAAACCCT TCAATGTTGA ATACCGGATC CAGAGGCCGG TGGATGGCAC GGTAGTAGAC GTCCAGTCCA TTGCAGAATA TGATCCGGCA CGAAAGGCTG TTTTTGGTGT GGTTCATGAT ATTTCCGAGA CCAAACGGGC AGAAGACGCG ATCCGTAAGG CCACCAAACA GATACTGCTC TTAAACAGCG TGACCCGGCA CGATATCCTC AACCAGCTCA ACACCCTGCT CGCTTATCTT GATCTCACCA AAAAGTCCGC AGAAAGCAAC CGGGCCATAC TTGATCTTGT TCAAAGGGAG CAGAGCGTTG CAGAGACTAT CCGGCGCCAG ATCACATTTA CCCGGGACTA CCAGAGCATC GGGATCCAGC CGCCGCAATG GTACAATGTA AAGGCAACGG TAGCGCATAT CCTTGAGACC ACCGATCTCG GAGGGATATC GGTTTTTATA GACACCGCAA ACCTTGAAGA GTATGCCGAT TCCCTGATCG AGAAAGTCTA CGCCAACCTT ATTGATAATA CCGTACGCCA TGGCGGGAAT GTTTCAGAGA TACGTCTCAG TTATACCTAC CGGGACGAGG ATCTTGTTAT CCTGTACGAA GATAACGGGA CCGGGGTCTC CCCTGATGAT AAGGAACAGA TCTTTGAGAG GGGTTTTGGC CACAATACCG GCTACGGCCT GTTCCTGGTT AAAGAGATCC TGTCCATTAC CGGTCTTTCC ATAAAAGAGA CCGGTCATTA TGGGAAAGGG GCTCGCTTTG AGATCCTTGT TCCCAAAGGG GCCTATCGTT TCCCGGAACC TTCATTATAG
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Protein sequence | MERESEQERI RELLKGNPKG LTIEEVSKKL GLNRSTAAKY LTSLVVSGQA DMRTLGPAKL FYLTQRLPMT NLLSLASDLI LILDQDLFIQ EANNPFLSFF HQTKAALKGV RIEHSPLASY FGGEHLAALT KALEGEETAF ETRFENEGSI RYFRTKCIPL VFEEGGRAAG IIFEDITEMK QYQHDLEEQV RLRTAELEQT NTALKKEIAE HTRAEESLAR NERRLRRAEG VAHFGNWEYY HEEKRVFVSE GMRTLYGISG NEPTLDELGQ ITLPEYRPVL GAAVRDLIRE NKPFNVEYRI QRPVDGTVVD VQSIAEYDPA RKAVFGVVHD ISETKRAEDA IRKATKQILL LNSVTRHDIL NQLNTLLAYL DLTKKSAESN RAILDLVQRE QSVAETIRRQ ITFTRDYQSI GIQPPQWYNV KATVAHILET TDLGGISVFI DTANLEEYAD SLIEKVYANL IDNTVRHGGN VSEIRLSYTY RDEDLVILYE DNGTGVSPDD KEQIFERGFG HNTGYGLFLV KEILSITGLS IKETGHYGKG ARFEILVPKG AYRFPEPSL
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