| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1234 |
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| Symbol | |
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| ID | 5409918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1252676 |
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| End bp | 1253560 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640868461 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001404395 |
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| Protein GI | 154150777 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.33164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTAA GGATAGGGAC CCGGGGCAGC CGTTTAGCGC TTGCCCAGAC TGCGATCGTA
ATAAAGAAGA TCGAGGCACT TGGTATCGAA GTAGAACAGA AGATTATCAG CACGCAGGGT
GACGAGGTCA CGGGAGTTCC CCTCCATGAG ATTGGAAAGC AGGGTGTTTT TGTGCGGGCG
CTGGATGATG CGATTCTCAA TAACGAGATC GACTGCGCCG TGCACAGCAT GAAGGACATC
CCCGCGATCC GGCCCTCCGG CGTGTTTACC TCTGCCATCC TCAAACGCGA TTCCCCCGCC
GATTACCTTG CGTTCACCGG CCCGGTATCC GCAGTAAAAG TTGTCGGTAC GTCCAGCACC
CGGCGCAGGG CCCAGCTCCT CCGCCATGAC CCGGGTCTTG ATATCCGCGA TCTCCGGGGG
AACGTGGACA CACGGATACG AAAGATGAGC GAAGGCCAGT ACAATGCCGT AGTGCTTGCT
GAGGCCGGGC TCTCGCGCCT TGGGATCCGG ATCCCGGGCG AACGGCTTCC CCCGGAGAAG
TTTGTCCCCT CCCCTAACCA GGGAACGATC GCGGTGGTGA GCCGGGCCGA CCCCTCGATC
ATGGAAGTGC TCTCGAGCCT CGATCACCCG GCAACACGAA AAGACGTTGC CATAGAGCGG
GCCGTGATGG AGCAGGTGGG AGCGGGCTGC TTTACCCCCA TGGGCATCTA CTGCAAGGAC
GGCAGCCTGA TTGCCGAAGT CCTCTCCCTT GACGGCACAC GGGCAGAACG TATCGAAAAG
AAGATCGGGA CACTTGAAGA AGCCCGGGCA GAGGGCAATG CCCTGCGGGA ACGGGCGGGC
GCCCTGATTG AGGAAGCATA CCACACACTC GGGATCTCGT TATGA
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| Protein sequence | MPVRIGTRGS RLALAQTAIV IKKIEALGIE VEQKIISTQG DEVTGVPLHE IGKQGVFVRA
LDDAILNNEI DCAVHSMKDI PAIRPSGVFT SAILKRDSPA DYLAFTGPVS AVKVVGTSST
RRRAQLLRHD PGLDIRDLRG NVDTRIRKMS EGQYNAVVLA EAGLSRLGIR IPGERLPPEK
FVPSPNQGTI AVVSRADPSI MEVLSSLDHP ATRKDVAIER AVMEQVGAGC FTPMGIYCKD
GSLIAEVLSL DGTRAERIEK KIGTLEEARA EGNALRERAG ALIEEAYHTL GISL
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