Gene Mboo_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1230 
Symbol 
ID5411909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1249519 
End bp1250061 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID640868457 
Productmethyltransferase type 11 
Protein accessionYP_001404391 
Protein GI154150773 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0668757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATG CAGCGCCTGC CGGCGGTCCG ACCCAGGACG AGATCCTTGC AGTCTCGTTA 
TTTAAGATGA ACATTACCTC GAGTGATACA GTTCTTGATC TCGGGTGCGG GACCGGCAAG
GTGGCAATTG CGGCTGCTTT GCGGGCAAAG AAAGTGTACG CCATTGACCG GCGTCCGGAG
GCAATTGCGT ATGCACAAAA AGCAGCACAG GAGGCCGGTG CAGCCAATAT CGAATTCTTC
TGCGGGGAAG CGGCAGATTT CCTGGCATCT GCTCCCCTTT TTGACTGCGC ATTTGTCGGG
GGTTCGCAGC AGATCGAAAC GTTCCTGCCG CTGATTGCAA AGAGAGTCCG CCGGGTGATC
GTGGTCAATG CCGTTTTAGT CTCCACCCTT GCAACCGTTA CTGCCACGAT GCAGGCGCTG
GGGATCTTCC GCGAGGCGGT AAACGTCCAG GTGTCCCGCT CCTGTGCACT CGGCAAGAGT
TTCATGTTCA AACCGATCGA TCCGGTGTAT ATCATTGTCG GGGCTGGTGC CGCATGCTCG
TAG
 
Protein sequence
MANAAPAGGP TQDEILAVSL FKMNITSSDT VLDLGCGTGK VAIAAALRAK KVYAIDRRPE 
AIAYAQKAAQ EAGAANIEFF CGEAADFLAS APLFDCAFVG GSQQIETFLP LIAKRVRRVI
VVNAVLVSTL ATVTATMQAL GIFREAVNVQ VSRSCALGKS FMFKPIDPVY IIVGAGAACS