Gene Mboo_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1228 
Symbol 
ID5411907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1248174 
End bp1248920 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content57% 
IMG OID640868455 
Producturoporphyrin-III C/tetrapyrrole methyltransferase 
Protein accessionYP_001404389 
Protein GI154150771 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2875] Precorrin-4 methylase 
TIGRFAM ID[TIGR01465] precorrin-4 C11-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGG CAAAAAAATC CCGGGATACC GGGGCAAAGG TCTGGTTTGT CGGTGCCGGA 
CCCGGGGATC CCGGTCTTAT TACGGTCAAG GGACAGGAAC TGGTCAACAC CGCAGATGTC
CTGATCTACG CAGGATCGCT TGTGAACCCT GTTCTTGTGG AGCAATCGGG AGCTGCCGTA
AAACAGGACA GCTGGGGCAT GCACCTCGAT GATATGGTCG ATGCACTGGA AAAGAATGCA
AAGGCCGGGA AAAAGGTCGT GCGCCTCCAT TCGGGCGATC CCGCTCTCTA TGGGGCAATT
GTCGAGCAGA TGGAGATCCT TGAGGCCCGG GGCGTGGCAA CGGAGGTTGT GCCCGGCGTC
TCCTCACTCT TTGCCGCTGC AGCAGCACTT AAGACCCAGC TCACCCTCCG GGGCGTTTCC
GAATCAGTGA TCGTGACCCG GCCGGCGGGT AAGACCCTGG AAAAAGATCA GCTTGCTGAA
TTCTCGCTCC TCAACACTAC CCTGGTGGTT TTCCTTGGCA CGGAAAAACT TGAAGAGATC
ACGGCAAAAC TCACCTGCCC TCAGGAAACC CCGGCTGCGG TGGTGTACCA TGCCTCGTGG
CCTGACCAGA AGATTGTCCG GGGCAATGTT GCCGATATTG CGGCAAAGGC ACGTGCAGCC
GGGATCGAGC ATACCGCCCT GCTCCTTATC GGGGGAGTTG TCGGCACCAG AAAGGAAGGC
CACATCACTT CGTACCTCTA TTCATGA
 
Protein sequence
MTMAKKSRDT GAKVWFVGAG PGDPGLITVK GQELVNTADV LIYAGSLVNP VLVEQSGAAV 
KQDSWGMHLD DMVDALEKNA KAGKKVVRLH SGDPALYGAI VEQMEILEAR GVATEVVPGV
SSLFAAAAAL KTQLTLRGVS ESVIVTRPAG KTLEKDQLAE FSLLNTTLVV FLGTEKLEEI
TAKLTCPQET PAAVVYHASW PDQKIVRGNV ADIAAKARAA GIEHTALLLI GGVVGTRKEG
HITSYLYS