Gene Mboo_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1223 
Symbol 
ID5411902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1244311 
End bp1244922 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content62% 
IMG OID640868450 
Productcobalt-precorrin-6Y C(5)-methyltransferase 
Protein accessionYP_001404384 
Protein GI154150766 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.849201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.519405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG TTGGTGTGGG GTGCGGACCG GGCCTGATCA CCGAGCAGGC GGTACAGGTG 
ATCCGCTCGG CACGGCTCAT TTACGGCTCC GGCCGGGCCA TCGAAATGGT ACAGAAACTC
ATCCCGCCCA CCTGCGTAGT CAGGTCCATC AGCGATTACC GGAACCTTGC CCAGCTCCCC
GAGAATGCCG TTGTGCTCTC GACCGGCGAT CCTATGCTTG CCGGCCTTGG GTACCTGCCC
GGGGAAGTGG TGCCCGGTAT CTCCTCCCTC CAGGTAGCTG CTGCCCGGCT CCATCTCCCG
CTCTCCCGGG TAGCCGTGAT CGTTGCCCAC GGGCGGGGGC ATGACCGGGC CATGCAGGAG
ACCATTGAGG AACTCCGCCG GGAAAAAGTG GTTTTTCTCA TTGCAGATCC CCGCTTTGAC
GTGGACGAAT TATACCGGCG CCTGGGTACC ATGGGGCTTC CCGGGCAGAT CCGGATCGCG
GTCTGTGAAA ATCTGGGATA TCCCGATGAA CAGATCCTGA CCGGTGATCT CGCAGCCCCG
CCCCTGCCTG ATGCGGATCT CTACTCCCTG GTGATCGGAC AATTCGGGGA AGTCGCAAAG
AAACCGGCCT GA
 
Protein sequence
MKIVGVGCGP GLITEQAVQV IRSARLIYGS GRAIEMVQKL IPPTCVVRSI SDYRNLAQLP 
ENAVVLSTGD PMLAGLGYLP GEVVPGISSL QVAAARLHLP LSRVAVIVAH GRGHDRAMQE
TIEELRREKV VFLIADPRFD VDELYRRLGT MGLPGQIRIA VCENLGYPDE QILTGDLAAP
PLPDADLYSL VIGQFGEVAK KPA