Gene Mboo_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1213 
Symbol 
ID5410385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1232390 
End bp1232866 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content47% 
IMG OID640868440 
Producthypothetical protein 
Protein accessionYP_001404374 
Protein GI154150756 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0272669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTCG TGAAGATCCC GCGGATGGAA AAACAGGAAT ATGATCGGCT TATTGAGAAA 
GGGTATGTCT GCCGTATCGC ATTCCAGGGG GAAAAATACC CTTATATTGC ACCGTTCCTG
TATGTGTTCG ACGGGTCTTT TATGTATTTC CTCTCCACCA AATATGGTAA AAAACAGGAA
TATTTCCGGA AAAGCCCGCA TGTGTCAGTA GAGATCGAAA AGTACACCAA GGATCTTTCG
TCTTATACCT TTGTTACCCT CCAGGGTTAT CTTGAGGAAG TCAGCGATTC CATTGAGAAA
AAGATCATCC GGGAAAAATT TGTCGATCTG ATTGTGGAAC GCGGGCTCTC CTGCAATATC
CTTGCTGCCC TTGGACATTC TACCGCAGAT CCCCCGGCAA AGATTGCCGA GGAAGAGCGG
TCGCTTGTCT GGAAGCTTGT TGGCGTGCGC GATCTGGTTG CCTTAAAAAA CATGTAA
 
Protein sequence
MEVVKIPRME KQEYDRLIEK GYVCRIAFQG EKYPYIAPFL YVFDGSFMYF LSTKYGKKQE 
YFRKSPHVSV EIEKYTKDLS SYTFVTLQGY LEEVSDSIEK KIIREKFVDL IVERGLSCNI
LAALGHSTAD PPAKIAEEER SLVWKLVGVR DLVALKNM