| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1211 |
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| Symbol | |
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| ID | 5410383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1230126 |
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| End bp | 1230839 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868438 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001404372 |
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| Protein GI | 154150754 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0177658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCC GATCCCTTGT GTGTATTCTT TTCCTTCTTG CAGTCTGCAC TGTTATTGTT
CCCCCGGCAT TATCAGATCC GACCGATGCG GCAGGATGGT ATGCGGCCGG GCAGAGCCTG
ACTGCTGCCG GGAATTACAC CCAGGCCCTC CAGGCATATC AGCAGGCAAT TGTACTTGAC
CCCGGTAATG CGGAGGCATG GAATGGTGTA GCCGATGTGT TCAACCGTGC CAATAAGTAC
ACCTCAGACC CGCTTGCCAC GCTCAAACTT GCGCTTGATG CATCCAATAA ATCACTTGCA
CTCAATGCAT CATCCCCGTC GGCATGGATC AACCGGGGAC AGATCCTCTA TAATATCGGG
TATTACTACC AGAGCCAGCT CAAGGATCAG GCCACTGCAA ATACCTATTA CCAGATGCAG
CTGGATGCTT TCAGCCAGGC AATCAGCATT GATCCGGATA ATGCCGAGGC ATGGTTTAAC
AAAGGTTATG CTCTCTGCGG AATGGGCCGG TGTACAGAGG GTGTTGCCGC ATTCCAGAAA
GTTGAAACCC TGGATCCTGA GTATCCCTAT CTCCAGCTCA ACCTTGCCCA GGCTGAGAAA
CTGGCAGCCG GCGAGACGCC CTTTTATGTC CAATATGCAG CGGAGATCGT GATGGCTGCA
ATCGCTATTG CTGCCGCTGC CTTGTGGTAT ATTGCAGTCC GGAAAAAATA TTAA
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| Protein sequence | MRTRSLVCIL FLLAVCTVIV PPALSDPTDA AGWYAAGQSL TAAGNYTQAL QAYQQAIVLD
PGNAEAWNGV ADVFNRANKY TSDPLATLKL ALDASNKSLA LNASSPSAWI NRGQILYNIG
YYYQSQLKDQ ATANTYYQMQ LDAFSQAISI DPDNAEAWFN KGYALCGMGR CTEGVAAFQK
VETLDPEYPY LQLNLAQAEK LAAGETPFYV QYAAEIVMAA IAIAAAALWY IAVRKKY
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