| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1203 |
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| Symbol | |
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| ID | 5411351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1218013 |
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| End bp | 1219665 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640868430 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001404364 |
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| Protein GI | 154150746 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0134222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC TGCGAAGCGA CACCATACGG AAAGGGTACG AGCGGGCTCC GAATCGTTCT
CTCCTGCGCT CGCTGGGAGT TACGGATCGG GAGATAGAAC TCCCGTTTAT CGGTATTGCC
AATGCATTCA ATACCATCGT GCCGGGTCAT ACGCACCTGC GTCAGCTTTC AGATAAGGTA
AAAGAGGGAA TTGCCGCGGC CGGGGGCGTC CCCTTTGAAT TTGGCGTGAT CGGCATTTGC
GATGGGATCG CGATGGGACA TGAAGGGATG CGGTACTCCC TTCCCTCCCG TGAAAATATC
GCTGACTCCA TTGAGCTCAT GGTACAGGCC CACCGGTTCG ACGGTCTTGT GTGTGTGGGT
ACCTGCGACA AGATTGTTCC CGGCATGCTC ATGGCTGCCG TCAGGACCAA TATTCCGACG
ATCGTTGTCA CCGGCGGAGC AATGCTTCCC GGCAGTAGCG GGGGTAAAGA TCTTTCACTC
ATTGATGTTT TCGAAGGAGT GGGAAAGGTT GCTGCCGGTA CCATGGAAGA AGATGCCCTT
AAGGAACTGG AATGCTGCGC CATGCCCGGC TGCGGGAGCT GCCAGGGGCT CTACACGGCA
AACACCATGG CCTGCATGAC CGAGACTATG GGCATGTCCC TGCCAGGCTG TGCAGCTGTT
CCTGCCGTGG AGGCGGCAAA ACTGCGGATC GCCCGGGAGA GTGGCGAAGC AATCATTCCC
CTGGTAAAGA AAAACAGTAC TGCCCGGGAT ATCGTGACCA AGAAGAGCCT GGAAAACGCA
ATCCGCGTGG ATATGGCATT AGGAGGATCA ACCAATACCG TACTGCACCT TATGGCGATT
GCAACCGAGG CTGAGATCCC TCTCTCTCTT GCAGACTTCA ACCGCATCGC AGATGAGATC
CCGCATATCT GCCACATGCT TCCGGCTGGC CCCTACTCTA TGCAGGCACT TTACAGGGCC
GGTGGTATAC CTGCTGTACT TAAGAGGCTG GAAAAACATC TTGACGACTG TCCGACCGTT
TCCGGTCTGT CTCTTTACCA GGTTGCACGG AATGCAATGA TCAAAAACGA GCAGGTAATA
AGATCCCTGG ATGCCCCGGT AAGTCCGGCC GGTGGGCTTC GCATACTCTT TGGTTCGCTT
GCTCCCGATG GCGCCGTGGT CAAATCTGCC GCTGTTCCAA AAGAGATCTG GAAACATACC
GGACCCGCCC GGGTCTTCGA GTCCGAGGAG CCTGCAATGG CAGCAATCCT TTCCCGGCAG
ATCCATGAAG GTGATGCGGT GATCATCAGG AATGAGGGGC CTCGTGGTGG GCCGGGGATG
CCCGAGATGC TTTCTGCAAC CTCGGCACTT ATGGGTGTGG GCTATAAAAA CGTAGTCCTG
ATCACTGACG GCCGGTTCTC TGGCGGAACC AGAGGGCCCT GTATCGGGCA TGTTGCACCT
GAGGCTGCTG TCGGTGGCCC GATTGCATTG GTGCAGGATG GCGACCGGAT TGCCGTGGAC
CTGTTTATGC GGACCATTGA CCTGCTGGTG GATCCAGAAG TCCTCACGTC CCGCAAGGCC
GCATGGAAAC CGGTGATGCG GCCGGTGACC GGTGTCCTTG CCCGCTATGC AAAGACCGTC
GGGCAGGCAA ACCTTGGTGC GGTGCTGAGA TAA
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| Protein sequence | MTDLRSDTIR KGYERAPNRS LLRSLGVTDR EIELPFIGIA NAFNTIVPGH THLRQLSDKV
KEGIAAAGGV PFEFGVIGIC DGIAMGHEGM RYSLPSRENI ADSIELMVQA HRFDGLVCVG
TCDKIVPGML MAAVRTNIPT IVVTGGAMLP GSSGGKDLSL IDVFEGVGKV AAGTMEEDAL
KELECCAMPG CGSCQGLYTA NTMACMTETM GMSLPGCAAV PAVEAAKLRI ARESGEAIIP
LVKKNSTARD IVTKKSLENA IRVDMALGGS TNTVLHLMAI ATEAEIPLSL ADFNRIADEI
PHICHMLPAG PYSMQALYRA GGIPAVLKRL EKHLDDCPTV SGLSLYQVAR NAMIKNEQVI
RSLDAPVSPA GGLRILFGSL APDGAVVKSA AVPKEIWKHT GPARVFESEE PAMAAILSRQ
IHEGDAVIIR NEGPRGGPGM PEMLSATSAL MGVGYKNVVL ITDGRFSGGT RGPCIGHVAP
EAAVGGPIAL VQDGDRIAVD LFMRTIDLLV DPEVLTSRKA AWKPVMRPVT GVLARYAKTV
GQANLGAVLR
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