Gene Mboo_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1188 
Symbol 
ID5412173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1199969 
End bp1200385 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content50% 
IMG OID640868414 
Producthypothetical protein 
Protein accessionYP_001404349 
Protein GI154150731 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.982767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0042804 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTGGTGC TCTTACTGTG CACCGCATCA GCAGTTGTAT CGGCAAAGGA ATTATCGGTG 
TCTCTCCCCG GCAACGGGGG ATACACCATC ACACCCGGTC ATAGCACCGG GATCATTCCC
CTGACGGTGT ACAATTCCAT TACGCAGGGG CAGACAAACT GGGAATCAAA AAGCGTTTCC
TCGTATATCA CTACCCTCAA TGTAAATCTG AACTGGGGGA ATCCTTCCAA TTCCTTGCAG
CTCACCATCT ATTCCCCCGA CGGATACGTA TTCGGCCCGT ATTACGATAG TTCCGACGGG
GTCACTGATG GCCGTATTGA TCTTACCATC CAGAACAGCA ATGGAATTGC AGAAGGAACA
TGGTCGTATA AGGTGTACGG CTACAGCGTC TCTGGAACAC AAACTTATTC CATATGA
 
Protein sequence
MVVLLLCTAS AVVSAKELSV SLPGNGGYTI TPGHSTGIIP LTVYNSITQG QTNWESKSVS 
SYITTLNVNL NWGNPSNSLQ LTIYSPDGYV FGPYYDSSDG VTDGRIDLTI QNSNGIAEGT
WSYKVYGYSV SGTQTYSI