Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1179 |
Symbol | |
ID | 5410784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 1190315 |
End bp | 1191004 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640868405 |
Product | hypothetical protein |
Protein accession | YP_001404340 |
Protein GI | 154150722 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.464441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.218261 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTGTAG AGGGATATAC TGGAATCCAA TGGGCGCTCA AAAATTCGTT TGTTCTCGTT GTACTGGGTG TTGTATTTCT CTACATCGTC ATGGGACTGG GTCTTCTTGG GACTTCCCTG CCCGTTATCG TTCTCGTCCT TCTTTTCGTC CTTATCATTC CCGCCCTCAT TTACCGGGTT TTAAGAAAAA TCGTTGATCC GGTTCCATTC TGGCTGCCTC TGTTTCCGGT CATTCCGGTA ATCGTTCTTT TCTCCAGCGG TCATCTCGGT GGAGCAGGCC TTCTCGAAAA TATCATCATC CCGTTTTCCC TGATATTCCT GCTCTCCACT TTGGCAGTGA TCGGCCCCTA CCCTCTTTTT GAGGAAAAGA TCGGTGCAAA AAACCCCTGG CAGGTATTTA CCCTTATGTC ATTTGTGGGT GTGGCTCTGT TCTTTTTCTC GACCATGGGA GAGAGCCTTG CGGGGCAGCC GCTGCCACAA TATTCCTCTA CATTCCCTCT TTCCGGTTGG ATTTTTGATG GCCTGGCAAA CATTCTGCAT CTTCAGGATG TCGTCTACGC ATTCGATTCC CACGTGTACA GTATTCTCTG GGCCTGCTCT TTTTACCTTG AGGTTTTTTT CGTTGCATTC CTGTATTATG CAGTGCTGGG CTGGGTCTCG TCTGCCAGTG CCGATACAGG CAAGGCATGA
|
Protein sequence | MVVEGYTGIQ WALKNSFVLV VLGVVFLYIV MGLGLLGTSL PVIVLVLLFV LIIPALIYRV LRKIVDPVPF WLPLFPVIPV IVLFSSGHLG GAGLLENIII PFSLIFLLST LAVIGPYPLF EEKIGAKNPW QVFTLMSFVG VALFFFSTMG ESLAGQPLPQ YSSTFPLSGW IFDGLANILH LQDVVYAFDS HVYSILWACS FYLEVFFVAF LYYAVLGWVS SASADTGKA
|
| |