Gene Mboo_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1179 
Symbol 
ID5410784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1190315 
End bp1191004 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content49% 
IMG OID640868405 
Producthypothetical protein 
Protein accessionYP_001404340 
Protein GI154150722 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.464441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.218261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGTAG AGGGATATAC TGGAATCCAA TGGGCGCTCA AAAATTCGTT TGTTCTCGTT 
GTACTGGGTG TTGTATTTCT CTACATCGTC ATGGGACTGG GTCTTCTTGG GACTTCCCTG
CCCGTTATCG TTCTCGTCCT TCTTTTCGTC CTTATCATTC CCGCCCTCAT TTACCGGGTT
TTAAGAAAAA TCGTTGATCC GGTTCCATTC TGGCTGCCTC TGTTTCCGGT CATTCCGGTA
ATCGTTCTTT TCTCCAGCGG TCATCTCGGT GGAGCAGGCC TTCTCGAAAA TATCATCATC
CCGTTTTCCC TGATATTCCT GCTCTCCACT TTGGCAGTGA TCGGCCCCTA CCCTCTTTTT
GAGGAAAAGA TCGGTGCAAA AAACCCCTGG CAGGTATTTA CCCTTATGTC ATTTGTGGGT
GTGGCTCTGT TCTTTTTCTC GACCATGGGA GAGAGCCTTG CGGGGCAGCC GCTGCCACAA
TATTCCTCTA CATTCCCTCT TTCCGGTTGG ATTTTTGATG GCCTGGCAAA CATTCTGCAT
CTTCAGGATG TCGTCTACGC ATTCGATTCC CACGTGTACA GTATTCTCTG GGCCTGCTCT
TTTTACCTTG AGGTTTTTTT CGTTGCATTC CTGTATTATG CAGTGCTGGG CTGGGTCTCG
TCTGCCAGTG CCGATACAGG CAAGGCATGA
 
Protein sequence
MVVEGYTGIQ WALKNSFVLV VLGVVFLYIV MGLGLLGTSL PVIVLVLLFV LIIPALIYRV 
LRKIVDPVPF WLPLFPVIPV IVLFSSGHLG GAGLLENIII PFSLIFLLST LAVIGPYPLF
EEKIGAKNPW QVFTLMSFVG VALFFFSTMG ESLAGQPLPQ YSSTFPLSGW IFDGLANILH
LQDVVYAFDS HVYSILWACS FYLEVFFVAF LYYAVLGWVS SASADTGKA