Gene Mboo_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1168 
Symbol 
ID5410437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1168209 
End bp1169006 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content50% 
IMG OID640868394 
ProductABC transporter related 
Protein accessionYP_001404329 
Protein GI154150711 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.463795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACA ACCTTCCACC GATTATCACC GCAGAAAACC TGACCGCAGG ATACCAGGAA 
AATACCGTCT GGCAGAACGC CAGTTTTGCG ATCGAACATG GCGAATTTGT TGCGATTATC
GGTCCCAACG GGTCGGGTAA GACGACCCTG TTTCGTCTGC TTCTCGGGTT ACAACAACCA
ATACGAGGCA ATATTAAAGT ATTTAATGCC CGGCCAAAAC GCGGTAATGA GCATATCGGA
TACGTGCCGC AAAGGCACGT AATTGATGCC GATACGACGC TCGAATCCCT TGAACTGGTG
CGGCTTGGAT TTTCCGGCAA TAAATGGGGA TTGAACCCAT TTTCCCGGAA CGATCACCAG
ATCGCGTTTG ATGCATTAAA AGCCGTCGGA GCAGAAGATC TGGCACATCG TTCCCTTGGG
GGATTATCGG GGGGAGAATT ACAGCGGGTA TTCCTTGCAG AAGCGCTGGT AAGCAATCCA
CATTTACTAT TACTGGATGA ACCGCTGTCG AATCTTGATA TCCGGCGTGA GCAGGAATTG
GTTCAGGTTA TCCATAATGT GGTTCGATCG CGCGATGTGA CTGCGTTGCT CATCGCCCAC
AACATAAATC CTCTCCTGCC GGTTCTCGAT AAAGTGATCT ATATCGCCAA CGGCAGGGTT
GCTATCGGGA AGCCGGATGA AGTCCTGACC TCCGAAGCCT TGTCCGCGTT ATACGGGGTT
CAGGTTGAGG TACTGCGGGG TTCCCGGGGT CAGATCGCAG TCATAGGCAC TGAAGAAAAC
CAGCATCATT ACGATTAA
 
Protein sequence
MKDNLPPIIT AENLTAGYQE NTVWQNASFA IEHGEFVAII GPNGSGKTTL FRLLLGLQQP 
IRGNIKVFNA RPKRGNEHIG YVPQRHVIDA DTTLESLELV RLGFSGNKWG LNPFSRNDHQ
IAFDALKAVG AEDLAHRSLG GLSGGELQRV FLAEALVSNP HLLLLDEPLS NLDIRREQEL
VQVIHNVVRS RDVTALLIAH NINPLLPVLD KVIYIANGRV AIGKPDEVLT SEALSALYGV
QVEVLRGSRG QIAVIGTEEN QHHYD