Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1168 |
Symbol | |
ID | 5410437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1168209 |
End bp | 1169006 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640868394 |
Product | ABC transporter related |
Protein accession | YP_001404329 |
Protein GI | 154150711 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.463795 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACA ACCTTCCACC GATTATCACC GCAGAAAACC TGACCGCAGG ATACCAGGAA AATACCGTCT GGCAGAACGC CAGTTTTGCG ATCGAACATG GCGAATTTGT TGCGATTATC GGTCCCAACG GGTCGGGTAA GACGACCCTG TTTCGTCTGC TTCTCGGGTT ACAACAACCA ATACGAGGCA ATATTAAAGT ATTTAATGCC CGGCCAAAAC GCGGTAATGA GCATATCGGA TACGTGCCGC AAAGGCACGT AATTGATGCC GATACGACGC TCGAATCCCT TGAACTGGTG CGGCTTGGAT TTTCCGGCAA TAAATGGGGA TTGAACCCAT TTTCCCGGAA CGATCACCAG ATCGCGTTTG ATGCATTAAA AGCCGTCGGA GCAGAAGATC TGGCACATCG TTCCCTTGGG GGATTATCGG GGGGAGAATT ACAGCGGGTA TTCCTTGCAG AAGCGCTGGT AAGCAATCCA CATTTACTAT TACTGGATGA ACCGCTGTCG AATCTTGATA TCCGGCGTGA GCAGGAATTG GTTCAGGTTA TCCATAATGT GGTTCGATCG CGCGATGTGA CTGCGTTGCT CATCGCCCAC AACATAAATC CTCTCCTGCC GGTTCTCGAT AAAGTGATCT ATATCGCCAA CGGCAGGGTT GCTATCGGGA AGCCGGATGA AGTCCTGACC TCCGAAGCCT TGTCCGCGTT ATACGGGGTT CAGGTTGAGG TACTGCGGGG TTCCCGGGGT CAGATCGCAG TCATAGGCAC TGAAGAAAAC CAGCATCATT ACGATTAA
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Protein sequence | MKDNLPPIIT AENLTAGYQE NTVWQNASFA IEHGEFVAII GPNGSGKTTL FRLLLGLQQP IRGNIKVFNA RPKRGNEHIG YVPQRHVIDA DTTLESLELV RLGFSGNKWG LNPFSRNDHQ IAFDALKAVG AEDLAHRSLG GLSGGELQRV FLAEALVSNP HLLLLDEPLS NLDIRREQEL VQVIHNVVRS RDVTALLIAH NINPLLPVLD KVIYIANGRV AIGKPDEVLT SEALSALYGV QVEVLRGSRG QIAVIGTEEN QHHYD
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