Gene Mboo_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1156 
Symbol 
ID5409874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1159051 
End bp1159635 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content56% 
IMG OID640868382 
Producthypothetical protein 
Protein accessionYP_001404317 
Protein GI154150699 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.149709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATA CTGCTGTTTC CCCTGCTTCG GTGCAACCGT GCGATTGGTT TACTTCCGGC 
TTCCATCCCT GGTGGCTCCT GCTCCTGTGG GGACTGCTCT CCCTTATCAT CGGGATCATG
TTCCTGTCCT CTCCGGGCAT CACGACCATT GTCTTTGTCA CCTTCCTTGG CGCTTACTGG
CTGGTAAGCG GGATCTTCTC GCTTGCGAGC CTTGCGATTG ACCGGACAGA CATGGGCTGG
AAGATTCTCC TTGCGGTCCT CAACCTGATC GCCGGTATCA TCGTTCTTAC CTACCCGCTG
TACAGTACTG TTCTCCTCCT GACGTTCCTT GTCATCCTTG TCGGGGTCTG GGCCTGCATT
ACCGGGGGCG CCCACCTGTA CGTGGCATTT GCCAAGAAGG ATGCAGGAAA TGGTGTCCTT
GGGTTTATCA GTCTCCTCTT TGGGATCCTG CTGTTGATCT TCCCGCTCAT CTCGGCAGTG
CTTGTGCCGT TTATCGCCGG GATCTTTGCG ATCGTCATCG GCTTTGCCGC TATCGTTGCC
GCGTATGGCG CAAAAAAGGT CGTGGATGCT GCACCGGCAG CGTGA
 
Protein sequence
MTDTAVSPAS VQPCDWFTSG FHPWWLLLLW GLLSLIIGIM FLSSPGITTI VFVTFLGAYW 
LVSGIFSLAS LAIDRTDMGW KILLAVLNLI AGIIVLTYPL YSTVLLLTFL VILVGVWACI
TGGAHLYVAF AKKDAGNGVL GFISLLFGIL LLIFPLISAV LVPFIAGIFA IVIGFAAIVA
AYGAKKVVDA APAA