Gene Mboo_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1153 
Symbol 
ID5409871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1155652 
End bp1156869 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content52% 
IMG OID640868379 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001404314 
Protein GI154150696 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.187317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA CAAAATTAGC AGAAGGCGTC TACTGGGTAG GTGCCATTGA CTGGAACCTG 
CGCGACTACC ACGGTTATAC CCTGCCGGGC ACGACATATA ATGCCTATCT TGTGGTAGGA
AAGAAGCATA CCGCACTCAT CGACAATACC TATCCCGGCC ATGAATTCCA GATGATGGAG
CGGATTAAGG ATATTATTGA TCCAAAGAAG ATCGACATCA TCGTAGCAAA TCACGTGGAA
AAAGATCACT CGGGAGCGCT CCCGATGCTC ACCAAACTCC TTCCGGGTGT CCCGATCTAT
TGTACGGAAG CAGCGGTTAC CGGTTTTGGA AAGTACTACG ATACCAAGGG CTGGAACTTC
AAGACCGTAA AAAGCCTGGA CAAGATCGAT TTGGGCGGAA AAACACTGGT GTTTGTCGAA
GCCCCGATGC TCCACTGGCC CGACTCCATG TTCACCTATC TCGCCGAGGA CAAGATACTC
TTCCCAAACG ATGCCTTCGG CCAGCACATT GCCGGCTGCG AACGTTTCGA TGACGAACTG
GGAAAAGAAG CATCCTTTGC CCATGCGCAG AAGTTCTTTG CAAACCTGAT AGTTCCCCTC
GCGCCCAAAG TATTAAAGAA ACTTGACGAG GTCACCAAAC TCGGCATCCC TATCTCCATG
GTCGCACCGA GCCACGGGAT CATCTGGCGA TCATATGCCG GCGACATCAT CACAGCATAC
GTGAACTGGT CGCATGGCGT TGCAAAGAAT AAAGTGACCA TAGTCTATGA TACCATGCAT
CACTCTACCG ACATGATGGC CCAGATGCTG GCCGAAGGCG TCATGGCCGA AGGCGTTGCG
GTGAAAGTCT GCATGCTCAA GGACGGGAGG TTCGAAGGAA CACACCGGAG CAACGTAGTC
ACCGAGATTC TTGATTCAAA GGCGGTTCTC GTTGGTTCTC CCACGCTCCA GGATGAAGTG
TACCCGACCG TGGCCGACTT CCTCTCGTAC CTGCACGGTG TCCGCCCCGG CAGGCTGACC
GCTAAAAAGA TCGGGTTTGC CTTCGGATCG CATGGCGGCC AGGGTGGCGC AATTAAGATC
GTCACCGAGG GGCTTAAGAA AGCCGGCATC GAGACAATCA ACGACGGATA TGAAGTGCTG
TACAAGCCCG ATGCAGCAGA ACTCGCAAAA TTGTACGAAC TGGGCCGGGA GGTTGCACGC
AAAGTAAAAA CAATGTAG
 
Protein sequence
MKATKLAEGV YWVGAIDWNL RDYHGYTLPG TTYNAYLVVG KKHTALIDNT YPGHEFQMME 
RIKDIIDPKK IDIIVANHVE KDHSGALPML TKLLPGVPIY CTEAAVTGFG KYYDTKGWNF
KTVKSLDKID LGGKTLVFVE APMLHWPDSM FTYLAEDKIL FPNDAFGQHI AGCERFDDEL
GKEASFAHAQ KFFANLIVPL APKVLKKLDE VTKLGIPISM VAPSHGIIWR SYAGDIITAY
VNWSHGVAKN KVTIVYDTMH HSTDMMAQML AEGVMAEGVA VKVCMLKDGR FEGTHRSNVV
TEILDSKAVL VGSPTLQDEV YPTVADFLSY LHGVRPGRLT AKKIGFAFGS HGGQGGAIKI
VTEGLKKAGI ETINDGYEVL YKPDAAELAK LYELGREVAR KVKTM