Gene Mboo_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1152 
Symbol 
ID5409870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1154312 
End bp1155376 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content59% 
IMG OID640868378 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001404313 
Protein GI154150695 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.592617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACAA CAGACCTGAA CAAACTGATG CTGGAGATGC CAAAAAGGCT GGGAGCAGAT 
CTTTCCGGGA TAGCAACCTG CAAGACACTG GCCGGGGGAC CGCCTTCTGC CGATCTCACG
CAGGTTCTAC CGACAGCGCA GTCTGCGATC TGTTTTGCGA TTGCGCTCGA TGAAGCCGCA
CTTGAGCGGT ACCTGGCAAA AAAGGACCAC GAGACGTTCA ACAAAAACAA GATCCGTGCC
ACCACTCTCG CCAACGGGAT TGCACTGGAG ATGGCCAATT TCCTTACCCA GATCGGGTAC
GCCTCGGTCC CGGTCTGTGC GAATTTCCAG TACCGGAACG GGAACGGCGT AACCTATGCC
GATCGTATTC CCCTTATCTC ACACCGTTAC CTCGCGGTCC GGTCCGGGAT CGGGCATTTC
GGGTACTCAG GCCACGTGAT CACGCGTGAC TACGGATCGG CCATTGTCCT TGGATCGGTG
GTTACCGAGG CAGAACTTGC GCCCACCGAT CCGCTTCCCG CAGGAGAAAA CTACTGCAAT
GACTGTCGGC TGTGCCGGGC AGTCTGCCCG TCCGGGTTCA TCTCCCCGGA CGCGAGGGTA
ACGGTGCGTC TTGGGGACCG CGAATTTTCG TACGCAAAAC GCGGAGCATA TTCCCGGTGC
GGGTACGTCT GCGGGGGGAT TGGGGGGCTT GACCGGTCCG GGAACTGGTC CAACTGGTCG
CCATCGCGGT ACCCGGTTCC GGAGAAAGAT GAGGAACTCC CGCAGGCAAT GGCCCGGGCC
ATGCCCGCAT ACCTTGGACG GACACTTCCC GATCAAATCT TTTACATCTC ATTTAGGCCC
GGCTATGCGC TGGATTATTC CTGCTCATTC TGCCAGCTGG TCTGCCACCG CGATCCTGCG
ATCCGCGGGA AACGGTACAG GATGGTAATG GAGGGAGGCG TTGTTGTCCA GGATGCAGAC
GGTTCCTGTC ACGCGGTATC CCCAAAAGAG GCACGGCAGA ATCTTGATGC CATGGAACCG
GAGCGGCGGT GGCTGTACGA GCCGGCGGAG GAGACACAGC AATAA
 
Protein sequence
MPTTDLNKLM LEMPKRLGAD LSGIATCKTL AGGPPSADLT QVLPTAQSAI CFAIALDEAA 
LERYLAKKDH ETFNKNKIRA TTLANGIALE MANFLTQIGY ASVPVCANFQ YRNGNGVTYA
DRIPLISHRY LAVRSGIGHF GYSGHVITRD YGSAIVLGSV VTEAELAPTD PLPAGENYCN
DCRLCRAVCP SGFISPDARV TVRLGDREFS YAKRGAYSRC GYVCGGIGGL DRSGNWSNWS
PSRYPVPEKD EELPQAMARA MPAYLGRTLP DQIFYISFRP GYALDYSCSF CQLVCHRDPA
IRGKRYRMVM EGGVVVQDAD GSCHAVSPKE ARQNLDAMEP ERRWLYEPAE ETQQ