| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1146 |
|---|
| Symbol | |
|---|
| ID | 5411593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1148059 |
|---|
| End bp | 1149426 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640868372 |
|---|
| Product | nitrogenase molybdenum-iron protein beta chain |
|---|
| Protein accession | YP_001404307 |
|---|
| Protein GI | 154150689 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01286] nitrogenase molybdenum-iron protein beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.101192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAT GCGTGCCCGA AGGAAAAACC GAACACACAA CCGGCAAGAT CAACCCGGCA
AAAACCTGCC AGCCGATCGG TGCCATGTAT GCATCCCTTG GGATCCACGG GTGCCTCCCG
CACAGCCATG GTTCGCAGGG CTGCTGTGCG TACCACCGTA TGCACCTGAC CCGGCATTTC
CGTGACCAGG TGCTTGCCGC CTCAAGTTCG TTTACCGAAG GGGCTTCGGT CTTTGGCGGG
GCGAGCAACC TGAAAACCTC GATCAAGAAC ATCTTTAAGA TCTACAACCC GGACATCATC
GCGGTCCACA CGACCTGCCT GTCCGAAACG ATCGGGGACG ATATCCCAAA CATCATCAAG
CAGTCCGAGA TCCCCGAGGG AAAGATCGTC ATCCACACCA ACACCCCCAG TTACGTGGGT
TCGCACATCA CGGGATTCTC CAATATGTGC AAATCCATGG TTGCGTACCT GGCAGAGGCA
CAAGGTGAGA CCAAAAAAGA GCAGGTCAAT GTCATCCCGG GGTTTGTAAA CCCCGGCGAC
ATGCGCGAGA TCCGGCGAAT CGTCACTGCG CTTGGGGTAA AACTCGTCAT GTTCCCGGAC
ACCTCCGGTG TCCTTGACGC ACCGCTGACA AGCAAGTACC AGATGTATCC CGAAGGCGGC
ACAACCATTG CCGAGATCCG GGACTCGGGC AACTCCGAAG TTACCCTTGC CCTTGGTGCA
TTCGCATCGA ATGCGGCAGC CGACCTCCTC CAGGAGAAAT GCGGCGTTAC CGGTATCCCC
TTAAAACTCC CCATCGGCCT GAAAGCCACC GATGATTTCA TCATGGCCGT AAAGGACTGG
TTCGGTGCAG ATATCCCAAA AGAGATCGCG ATCGAGCGCG GCCAGGTCAT CGATACGCTG
ATCGACACGC ACTTCCACTA CCAGGGAAAG ACGGTGGCGA TCTTTGGCGA CCCCGATCAT
GTGATCGCAA TGACCGAGTT TGTCATCACC ATGGGCATGG TCCCGAAGTA CGTCCTTACC
GGGACGCCGG GAAAAGAGTT CGAGGCAACG GTCACAAAGA TGCTCGACGA AGCGGGCATA
ACGGGAAGCA GGGTCAAAGC CGAGGGCGAC CTTTTCGAGC TTCACGAATG GATCCGGGAG
GAAAAAGTCG ATCTGATGAT CGGGACAACC TACGGGAAGT ACATTGCACG GACCGAGGAC
ATCCCGCTTG TCCGGTTTGG CTTTCCCATT CTTGACCGGG CCGTCCACCC GCTCATGCCC
GTGGTTGGCT ACCGGGGCTG CCTGCGCTTG ATCGAGCAGA TCAGTAACGC ATTTCTCGAA
CGCCGCGACC GCGATGCCCT TGACGAGGAC TTCGAACTGG TCCTGTAG
|
|---|
| Protein sequence | MLECVPEGKT EHTTGKINPA KTCQPIGAMY ASLGIHGCLP HSHGSQGCCA YHRMHLTRHF
RDQVLAASSS FTEGASVFGG ASNLKTSIKN IFKIYNPDII AVHTTCLSET IGDDIPNIIK
QSEIPEGKIV IHTNTPSYVG SHITGFSNMC KSMVAYLAEA QGETKKEQVN VIPGFVNPGD
MREIRRIVTA LGVKLVMFPD TSGVLDAPLT SKYQMYPEGG TTIAEIRDSG NSEVTLALGA
FASNAAADLL QEKCGVTGIP LKLPIGLKAT DDFIMAVKDW FGADIPKEIA IERGQVIDTL
IDTHFHYQGK TVAIFGDPDH VIAMTEFVIT MGMVPKYVLT GTPGKEFEAT VTKMLDEAGI
TGSRVKAEGD LFELHEWIRE EKVDLMIGTT YGKYIARTED IPLVRFGFPI LDRAVHPLMP
VVGYRGCLRL IEQISNAFLE RRDRDALDED FELVL
|
|---|
| |