Gene Mboo_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1143 
Symbol 
ID5411590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1145636 
End bp1145962 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID640868369 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001404304 
Protein GI154150686 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.903165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.919157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACTCA TGCGTGCAAT AGTACGACCG GAAAAGAAAG ACGAAGTCCT TGCAAACCTT 
TCTGCAGCGG GATTCAATGC CGCGACCATG GTAGACGTGG TCGGGCGGGG CAAGCAGAAG
GGGATCAAAA TTGGCGGGAT GGTGTACGAC GAGATCCCAA AGGTGCTCAT CCTCATGGTC
ATTCCCGATG AGGAGAAGGA CCGGGTCGTA AAGATCGTGC TTGAGACCGG GCGGACCGGG
GCAAACGGTA CCTTTGGCGA CGGGAAGATC TTTGTGAGCC CGGTTGACGA GGTCTATACC
ATATCAAAAA ACAGCAGGGG ACTTTAG
 
Protein sequence
MLLMRAIVRP EKKDEVLANL SAAGFNAATM VDVVGRGKQK GIKIGGMVYD EIPKVLILMV 
IPDEEKDRVV KIVLETGRTG ANGTFGDGKI FVSPVDEVYT ISKNSRGL