Gene Mboo_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1140 
Symbol 
ID5411587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1142111 
End bp1143802 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content56% 
IMG OID640868366 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001404301 
Protein GI154150683 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGAAC CTGATGCCAG AACACTGTTT TTGATCCTTT TCCTTGCAAA TGTCTTCCTT 
GCACTGATGC TTTTTGCATT CTGCCGGACA CAGAAGACCT ATTACGGGCT CCGCACCTGG
ATGTTTGGCC TGATGATCAT CTCCTGCGGC TATTTCCTGT TCATGCTCCG CGGTGCAATA
CCCGACCTGC TCTCAGTGAT TGCCGCAAGC ATTCTTGTTA TCCTCTCTGC CATGCTCCGG
GCAGACAGTA CCCGGAGGTA TTTCTGGTCA AAACCGGTCC CTCCGGCCAT CTATGCCGTG
CTCATCCCGT TAGCGCTCGG GTTTGTCTAT TATACGTATA TCGCGCCTTC TGTCCTTCCC
CGCGACATAC TCTCGAACCT TATTCTTGCC CCCGCCATTC TGGTGGCCGC GTACTATGCG
GCATGTGCAC CCGACCCGGA GTCCCGCCCG CTCAGGCTCG GTTTTGCCGC CTCGCTTGCG
GTTGTTATCG TGCTGCTGAC GGCCCGTAAT ATCGTCTGGC TGTTTACCCC CGGGGGCGAT
TATACCATTA CCTCCCCTGA CCCGCTCAAC CTGCTCCTCT TTACCGTTGT GGTAATCACC
GATATCCTCA CTACGGGATT ATTCTTAATG CTCAATATGG CCCGGTCCCA GTCTGAACTG
CGTGCAAGCG AAGAGCGGTA CAGGAATCTT GCCGACAACC TGCCGGACTA CGTGGTCGTC
CATGACGGGA AACACATACG GTTTGCCAAC CTGGCGGCAG CCCGGATCCT GGAGCGGTCC
CAAACGGATC TGGCCGGTCA GCCGCTCGCT TTGTTTCTGA CCCCGGCAAG CGCCGATGCA
ACAGAAACAC GGATCCGGGC CGTACTTGGA GGGGCATCAA AGCCGGCCCC GGCAGAGATC
GACATCCAGC TGCCAAAAAA GAGCATCCGG CACTGCATTG TCCGGACAAC AGTGATCCAC
GATAATGGCG TTCCCGCACT TATGTCGGTC CTCACCGACA TTACCGAGCG CAAGGCCGCA
GAGGACGCCC TGTCCCGGGC AAACAAGAAA CTCACTATCC TTTCCTCAAT TACCCGGCAC
GACATCAAGA ACCAGCTCCT CCCCCTTTCG GCGTACCTGG ATCTCGCGGG GGAAAACCTC
GATAAACCCC GGGTGGTATC GGATTACTTA AAAAAAGCGG GAAAAATTTC CGGGATTATC
GGGAACCAGA TCGATTTTAC CCGGGCATAT GAAAGCCTGG GGACAACTGC CCCGGTCTGG
CAGAATGTTG CCGAAAGTAT CCGGAGGGCC GAGACCTCAC TCCCTGCCGG GAATGTCCGG
ATCAGCGTGG ACCGTCCGGA CCTTGAGGTG TTTGCCGATC CGCTCATTGA GAAGGTTTTT
TTCAACCTGA TTGACAATGC CCTGAGGTAT GGAGGAAACC GGATGGAAAC CATCCGGTTT
TATTCCCGCA AAACCCCGGC CGGGCTTATC CTTGCCTGCG AAGATGATGG TGCCGGTATA
GCAGAAGAAG ACAAAAAACA GCTTTTTTCC AAGGGGTTTG GGAAGAACAC CGGCCTTGGC
CTTTTCCTCT CCCGCGAGAT CCTCTCCATT ACCGGGATCA CCATTACCGA AACCGGCGAG
CCCGGCAAAG GGGCCCGGTT CGAGATGCTC GTGCCAGCCG GGGAGTACCG GTTTACCGGA
GAGAGCCAGT AA
 
Protein sequence
MWEPDARTLF LILFLANVFL ALMLFAFCRT QKTYYGLRTW MFGLMIISCG YFLFMLRGAI 
PDLLSVIAAS ILVILSAMLR ADSTRRYFWS KPVPPAIYAV LIPLALGFVY YTYIAPSVLP
RDILSNLILA PAILVAAYYA ACAPDPESRP LRLGFAASLA VVIVLLTARN IVWLFTPGGD
YTITSPDPLN LLLFTVVVIT DILTTGLFLM LNMARSQSEL RASEERYRNL ADNLPDYVVV
HDGKHIRFAN LAAARILERS QTDLAGQPLA LFLTPASADA TETRIRAVLG GASKPAPAEI
DIQLPKKSIR HCIVRTTVIH DNGVPALMSV LTDITERKAA EDALSRANKK LTILSSITRH
DIKNQLLPLS AYLDLAGENL DKPRVVSDYL KKAGKISGII GNQIDFTRAY ESLGTTAPVW
QNVAESIRRA ETSLPAGNVR ISVDRPDLEV FADPLIEKVF FNLIDNALRY GGNRMETIRF
YSRKTPAGLI LACEDDGAGI AEEDKKQLFS KGFGKNTGLG LFLSREILSI TGITITETGE
PGKGARFEML VPAGEYRFTG ESQ