| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1137 |
|---|
| Symbol | |
|---|
| ID | 5411584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1140073 |
|---|
| End bp | 1140684 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640868363 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_001404298 |
|---|
| Protein GI | 154150680 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.53989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAT CTGCACCAAA AGGCTGCCTG GAGTTCCTGA GCGACAAGAA CAGTATGCTT
GTCCTTGTGG ACTACCAGTC AACAATGTTC AAAGGCGTTG CATCGGGAGA CAAGACCATC
ATCCGGAATG CGGCGTTCTG TGCGGCAAAA GCGGCACAGA TTCTTTCTGT CCCGGTGGTA
CTGTCGGCTA TCAATCCTCC CTCAAACGGG GAGTTCATGC CGGAGATCAC CGCGTTGTTC
CCGGGGCAGG AGGCCTTTGC ACGCAAAGTC CCGGGGTTCG ATGCCTTCGA GGATGAAAAG
ACCTGGAACG CGGCAAAGAA AACCGGCCGC AAAAAGATGG TCATCTCCGG CCTGTGGACA
AGCATGTGCT TTGCCTATAC TGCTCTTCAT GCCCTCAGGG AAGGGTACGA GGTGTACGGC
CTGATGGACG CTGCCGGTGA TTCAACACGC GATGCCCATA CGTACGGCAT CCGGCGGATG
ATCCAGGCCG GCGTGATCCC GATCACGGTC GAATCGCTCG TGTCCGAATG GATGCATGAC
TGGACCAACC CGAAGGTGCC CGAGCTCATA AAAGAGGTCT ACTCGCACTA CGGGTACATG
ATCGGCTTTT AA
|
|---|
| Protein sequence | MTTSAPKGCL EFLSDKNSML VLVDYQSTMF KGVASGDKTI IRNAAFCAAK AAQILSVPVV
LSAINPPSNG EFMPEITALF PGQEAFARKV PGFDAFEDEK TWNAAKKTGR KKMVISGLWT
SMCFAYTALH ALREGYEVYG LMDAAGDSTR DAHTYGIRRM IQAGVIPITV ESLVSEWMHD
WTNPKVPELI KEVYSHYGYM IGF
|
|---|
| |