Gene Mboo_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1131 
Symbol 
ID5411437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1135708 
End bp1136097 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content53% 
IMG OID640868357 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001404292 
Protein GI154150674 
COG category[K] Transcription 
COG ID[COG4738] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0618637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGGA CACGCATGAA GACCGAAAAA GTCATGTATT TCTCAGAAAA AGAAGAAGAG 
TTCGCAAACC TGCTCATTGA GATTGGCACC AGGAAAAATA TTGCAAAGGT CCTGGTCTTC
CTTGCCGGCA CTTCCCCGGC AACGTCCCGG GCCATCGAAC GGGGCACGGA TCTCCGCCAG
CCCGAAGTGA GCATTGCCAT GAGATCACTT TCCAACCGTG GCTGGGTCTC AAGCCGCGAG
AGCAAGGCAG AGAGCAAGGG GCGGCCGGTC AAGATCTACG TCCTTGCAAA GCCCATTGGC
GAGATCATGG ACAGCATCGA GAGCGAGAAG AAGAAAGAGG CCACAACGCA GCTTGCCATG
ATACAGAAAT TACGGGAATA TATCCGGTAA
 
Protein sequence
MDGTRMKTEK VMYFSEKEEE FANLLIEIGT RKNIAKVLVF LAGTSPATSR AIERGTDLRQ 
PEVSIAMRSL SNRGWVSSRE SKAESKGRPV KIYVLAKPIG EIMDSIESEK KKEATTQLAM
IQKLREYIR