Gene Mboo_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1130 
Symbol 
ID5411436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1134956 
End bp1135513 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content56% 
IMG OID640868356 
Producthypothetical protein 
Protein accessionYP_001404291 
Protein GI154150673 
COG category[S] Function unknown 
COG ID[COG4739] Uncharacterized protein containing a ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.136033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTG AACAGGATGC AGTAAAGACC GTTGCCGGCC TCATGGCAAT TGCAGCACGG 
ACGGCACCCA AGGCATGCGG ACTTGACTCG ATCAAGATTG AGATCGTGAC CGGTAAAGAG
CAGCAGGCTC TCGGGAACAA AATGATCGCC GCAGCAAAAG AGACCGGCAT GGATTTTCTG
CGGATCAACG GCGAGCAGGC GAAAGCAAGC GATGCCACGG TCCTCATCGG GGTCGAGGGC
ACAAAGACGC TTGGCATCAA CTGCGGCGGG TGCGGGTATG CCAGCTGCGC AGAGATGGTA
AAGGCACAGA AAGCAAAAAA GAACAAGGGC TCTGCCTATG CCGGCCCAAA CTGCGTGCTC
AAGATTTCCG ATCTTGGCAT TGCGGTCGGC TCAGCAGTAA AGACCGCCCA GATCCATAAC
GTGGACAACC GGATCATGTA CACGGCCGGG TTTGTTGCCC TAAAAGCCGG TTCCCTCAAA
GGGTGCAGTG TTGCCTACGG CATCCCGCTC CGGGCGTCAG GCAAAAGTAT CTACTTTGAT
GTCCAGTTCG GGCACTAA
 
Protein sequence
MTTEQDAVKT VAGLMAIAAR TAPKACGLDS IKIEIVTGKE QQALGNKMIA AAKETGMDFL 
RINGEQAKAS DATVLIGVEG TKTLGINCGG CGYASCAEMV KAQKAKKNKG SAYAGPNCVL
KISDLGIAVG SAVKTAQIHN VDNRIMYTAG FVALKAGSLK GCSVAYGIPL RASGKSIYFD
VQFGH