Gene Mboo_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1125 
Symbol 
ID5411431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1129975 
End bp1130667 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content56% 
IMG OID640868351 
Producthydrogenase-4 component E 
Protein accessionYP_001404286 
Protein GI154150668 
COG category[C] Energy production and conversion 
COG ID[COG4237] Hydrogenase 4 membrane component (E) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.457842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.790146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC CCGCATTCTT TGACGGCCTT GTCAAGATCC TCTTTGTCTG CGTGATCGTC 
ACCTCCGCGT ATATCATCAC GACCCGGAAC CTGGTCTCTC TTGTCCGGGT GTACGCGCTC
CAGTCGCTCT CGCTTGTGGC AATCGCGCTT GCCCTTGCAT GGTACGAGAA TGCGGCAATC
CTCCTTGCGA TTGCCCTTCT CACCCTGGTC TTCAAGGTGA TCGTCATCCC GTACTTCATC
GCAACCGTCC AGGAGAAGAT CCGGATAAAA CGGGACATCG AGTTCCATTT CCTCAGCCCG
GCAAGCTCCC TCCTGATCTC GCTTGCCCTC ATGATCGTCG TGTACATCAC GCTCTCCCGG
GTATTCTCCC CGGCTCCCGC TGAAGGCAGC CTCTTTTTCT TCGGGGCGGT CATCGGGATC
TCGCTTGTCA TGATGGGCAT GATGGTGACG TTCTCCCGGA AAAAGGCGAT CACAAAAGTG
CTCGGGTACC TTTCTATGGA GAACGGGGTG CTGCTCTTTG GGCTCTTTGC CACCGAGCTC
CCGTTCATCA TCGAATTTCT GATCGTAATA GACCTGGTCA TCCTCATCCT GTTAACCACC
ATCCTCACGG TCGGGATAGA CTCTACGCTC GAGGATTACC ATAACCGCCT CCACCGGTTC
TACCTCTGGG AAGACCAGGA GGAATCGCCA TGA
 
Protein sequence
MSDPAFFDGL VKILFVCVIV TSAYIITTRN LVSLVRVYAL QSLSLVAIAL ALAWYENAAI 
LLAIALLTLV FKVIVIPYFI ATVQEKIRIK RDIEFHFLSP ASSLLISLAL MIVVYITLSR
VFSPAPAEGS LFFFGAVIGI SLVMMGMMVT FSRKKAITKV LGYLSMENGV LLFGLFATEL
PFIIEFLIVI DLVILILLTT ILTVGIDSTL EDYHNRLHRF YLWEDQEESP