| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1119 |
|---|
| Symbol | |
|---|
| ID | 5411363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1119490 |
|---|
| End bp | 1121280 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640868345 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001404280 |
|---|
| Protein GI | 154150662 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGAC AGGTTACCCT CCGGGGATAT TCATTCTCAC ATACCGATCT GGTCCGTTCC
ATCGTCATTG CCTCGCTGAC TGTTTCTGTT ATCCTGATAA CCGCACTGGC TCTTGCCAAA
AATGCCGGGG ACCTCTATCC CCAGCTCTTT TATTTTCCCA TCCTGTATGC AACGTATTTC
TATCCCAAGC GCGGGATCAT CCTTTCCGGC CTTTGCGGGG TCATCTACGA ATGCCTGGTC
TACTTCTCGC TCTACCCGGA TGTTCTTGCA CTCTGGTCGG CTACCGCCCA GGCCATCCTT
TTTATCTGCA TCGCGCTTGC CGTGGCTTAC TTCACCAACC TGATCCGGGT ATCCGAGGCC
CGGTACCGGA GCATCTTTGA AAATTCCCTT CTCGGGATCA TCCTTTTTGA CAAGAACCGG
TTTACGATCC GGCTTGCAAA CCAGCAGGTG GCAACCATGC TCGGATATGA GGCAGAGGAA
CTGGGCGGGA TTGCATTCTC CGATCTCTTC TTCTCGCAGG ACTTCAAACG CAGGTTCTTT
GAGCACCTTG GATCCGGTGA GGATATCAGG AATTTCGAGA CCTGTTTTGT CACAAAGGAC
AAAAGGCCAC ACTGGGTCAA CCTTTCCTGG AGCCGGATCG ATGACACCAT CGTGAGCTGC
TCAATCACCG ATATTGACGC GGAGAAATCT GCACGGGAAC TTGCGGCAGA CAGTTCGATC
CAGTACCGCC AGGTGACCGA AAACTCGCCC ACAGGTATGG TGATCACGGA TCGCACCACA
ATCCTCTTTG CAAACCCGGC GTTTTTTTCC TTCTCCGGCT ATGGGCAGGA AGAATGCTCC
GGGATGAATC TTGCCGATCT GGTCATTCCT GAAGACAAAG ACCGGTTCCG GTCGTTTTCT
GATCGCTGGG GGTTTCTGGA GCCTGCCCCT GATCGTGATG AATTCCGGTT TCTCACCAAA
AACGGGGAGA CAAGGAGGGC TGTGCTCTAC TTTACCCCGA TTATCCGGAA TAACCGTCCT
GCGGGACTCG TCAATATCAT TGACAATACC GAATGGGAGG AATACCGCGA ACGGGTGGAG
CAGACCAAGG AGCGGAGGCG CGAGATGATG CGGGCGGTTG CCCACGAGCT GCGGACCCCA
CTCCAGCCGG TGCTCGGGTA CCTTAACCTC CTTCTCCAGG ATCCTCCCGC TTTTGGGGTG
ACCGAGGAGA CCCGGCAGAT CCTTGAACGG TGTGCAAAGA GCGTGGACCG CGAGCGCCAG
ATCATCAACC AGATGCTTGA ACTCTCGGTT CTCGAAGAAG AGGAATCCAG CCTTGACTAC
TCGGTCTTTC CCGTTGCCGG TATGATAAAC AACGTAATCT CAGGAGGCGG GTATGCACTC
AAGGCAGAGA TCGCAGTTGA TGTCCCGGCA GATCTTCTTT TTGATGCAGA TCGCCAGAAA
CTCAGCTACG TTATCGATGT GCTGGTGGCA AACGGGGTGG CATATTCCAA GCCGCCACGG
AAGATCTGGA TTACGTACCG CGACTCGCCA TCGCACCCTT TCCACCGGCT TGCTATCCAG
GATAACGGTG TCGGGATCAC TGAAGCCCAG CTTGATGAGA TCTTCAAATC CGACGGAGGA
ACCGGGCCGG CACGTGAAGG TGTCGGCGGT ACTGGCCTTT CACTTGCCAT TGCAAAAAAG
TATGTCCAGC TGCATGGGGG ATATATCAGC GTGGACAGTA TGGTAAACAT CGGGAGCACC
TTTACCCTCC ATATCCCCAA AAAACGACCT GACGGGACGG AATTACCATG A
|
|---|
| Protein sequence | MERQVTLRGY SFSHTDLVRS IVIASLTVSV ILITALALAK NAGDLYPQLF YFPILYATYF
YPKRGIILSG LCGVIYECLV YFSLYPDVLA LWSATAQAIL FICIALAVAY FTNLIRVSEA
RYRSIFENSL LGIILFDKNR FTIRLANQQV ATMLGYEAEE LGGIAFSDLF FSQDFKRRFF
EHLGSGEDIR NFETCFVTKD KRPHWVNLSW SRIDDTIVSC SITDIDAEKS ARELAADSSI
QYRQVTENSP TGMVITDRTT ILFANPAFFS FSGYGQEECS GMNLADLVIP EDKDRFRSFS
DRWGFLEPAP DRDEFRFLTK NGETRRAVLY FTPIIRNNRP AGLVNIIDNT EWEEYRERVE
QTKERRREMM RAVAHELRTP LQPVLGYLNL LLQDPPAFGV TEETRQILER CAKSVDRERQ
IINQMLELSV LEEEESSLDY SVFPVAGMIN NVISGGGYAL KAEIAVDVPA DLLFDADRQK
LSYVIDVLVA NGVAYSKPPR KIWITYRDSP SHPFHRLAIQ DNGVGITEAQ LDEIFKSDGG
TGPAREGVGG TGLSLAIAKK YVQLHGGYIS VDSMVNIGST FTLHIPKKRP DGTELP
|
|---|
| |