| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1107 |
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| Symbol | |
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| ID | 5411267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1104407 |
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| End bp | 1105756 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640868333 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001404268 |
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| Protein GI | 154150650 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.316445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.383649 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGAC AACCATCTCT CATGGGGGAA CGAGAAGAAA GTTTTGTAGA CCTCTGGCTG
TTTATTATCG TTGCCACAAC CATCATTGCA ATCCTCATCA ACATTCTTGC GCTCCATTAT
GGAACAGCGG CCGTGGCTGC AAATCTTCTC TATATCCCGA TTGTCCTTGC AGCGTACTGG
TACCCCCGCT GGGGAATCTC GTACGCAATC GGGGTCTCTG CCCTGTTTAT TGCCATTGTC
GCTTTCGTGA CCGGGGGTAC GGTTGCCCAG GTAGCGGCTT CCTTTGTTAC ATGCCTTGTG
GTTATCGGGG TAGCAGCGGT TGTTTCAAGC CTTGCCATTC ATATGCGCAA AAACGAGGTA
AAATACCGGG GTATCTTCAA CCATTCTGAG GCAGGTATCG GCCTTGTGAA TAACCCGGAT
CATAAAGTAA ATGAGGTAAA CCGACGCTTT GCAGATACAC TCGGGTACGA GCCCGCCGAA
ATCGAAGCAA GAACATTCGT TGACCTGTGG GCCGATGCGG CAGACCGGGA CCGGTTTTTC
CAGCGCCTTG CCAGCCAGGG TAATGTGGAG AACCTGGAAA CCCGGTTTGT GACAAAGGGC
GGCGCCACCC GGTGGATGCT GCTTTCTGCA GGAATGCTTC CGGATGACCA GTTTGTCTGT
ACGATCGTAG ATATTACCGC CCGTAAGCAG GCCGAGGAAT CGCTTATTAT CAAAGATCAT
GCGATCAGTT CCTCGCTGAA TGCGATTGCG ATTATGGATC TTGATTTTTC GATCACGTAC
GTGAACCATT CTCTGATTTC CATGATGGGC TCCCGCAGCG AAAGGGAGTT TGCCGGCACA
AATCTCTGGA AATGTATGGC ATCACCTCAG GAGATCGAAA AGATACGGGA CACACTCTCG
CACAAAGGGA GCTGGCTTGG CGAGATCCTG CTCAAAAAAA CGGATCAGAC GCAGTTTTAT
GTCATGCTTT GGATTAACCT GGTAAGGAAT GAGACCGGCA ACCCGGTCTG CATCATGGCC
TCGTTTATAG ATATCACCGA CCGCAAGCAG ATGGAATCCG TAAAACGGCA GGCCCTGGAG
CAGATTGAGA AGAATATCGA GCAGTTTGCC ATCCTTGGCG ATCACATCAG GAATCCGCTT
GCTGTCATTG TCGGTCTCTC CAGTCTTGCA CCCGGGGATG TATCGGATAA GATCATCCTG
CAGGCCCGTG AAATCGACCG GATCGTAACC CAGCTCGACA TGGGCTGGAT AGAATCGGAG
AAAGTGAGGG AATTTATCAA GCGGTATTAC ATGGTAGGTA TCCAGGATAT CAGCGATACC
GGTGGGGCCC GGGAAGGCCT GGTTCGCTGA
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| Protein sequence | MTGQPSLMGE REESFVDLWL FIIVATTIIA ILINILALHY GTAAVAANLL YIPIVLAAYW
YPRWGISYAI GVSALFIAIV AFVTGGTVAQ VAASFVTCLV VIGVAAVVSS LAIHMRKNEV
KYRGIFNHSE AGIGLVNNPD HKVNEVNRRF ADTLGYEPAE IEARTFVDLW ADAADRDRFF
QRLASQGNVE NLETRFVTKG GATRWMLLSA GMLPDDQFVC TIVDITARKQ AEESLIIKDH
AISSSLNAIA IMDLDFSITY VNHSLISMMG SRSEREFAGT NLWKCMASPQ EIEKIRDTLS
HKGSWLGEIL LKKTDQTQFY VMLWINLVRN ETGNPVCIMA SFIDITDRKQ MESVKRQALE
QIEKNIEQFA ILGDHIRNPL AVIVGLSSLA PGDVSDKIIL QAREIDRIVT QLDMGWIESE
KVREFIKRYY MVGIQDISDT GGAREGLVR
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