| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1105 |
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| Symbol | rbcL |
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| ID | 5411265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1101010 |
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| End bp | 1102302 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640868331 |
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| Product | ribulose bisophosphate carboxylase |
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| Protein accession | YP_001404266 |
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| Protein GI | 154150648 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
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| TIGRFAM ID | [TIGR03326] ribulose bisphosphate carboxylase, type III |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.199893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG ATTGGTACAA TGAATTCGTT GATCCGAACT ACAAACCCGC TAATGATGAT
CTTGTCTGTC TTTTTTACTT TGAACCGGCA GCAGGAATAA CCGACAAGGA GGCGGCCGGA
CGGATCGCTT CCGAAAGCTC GACTGGCACT TGGACAACGC TTGCCACACT GCCTCCACGG
ATGAAGAAAC TGGAGGCAAA GGCGTTTGAA TTTGATGGCC ACTATGTCAA GGTCGCCTAC
CCACTCGCAC TCTGGGAAGA AGGAAATGCC GTGCAGCTGC TGAGCGGGAT CGCGGGCAAT
ATCTTTGGTA TGAAAGCGCT CAAAAACCTG CGCCTCATTG ATGCGACCCT TCCCTCCGCG
TACACCCGGG AATTCAAAGG CCCCCATTTC GGGATGGACG GGATCCGGAA GATGATGGGG
ATCCGTGGCC GGCCACTTAC CGGTGCCGTG CCCAAGCCAA AGATTGGTTT TTCGGCAAAG
GAGCACGCCG AGATCGGGTA CGAGACCTGG ATGGGTGGAT TCGATTTCGT CAAGGACGAT
GAAAACCTCA CTTCGACATC GTTTAACCGG TTCGATGACC GTGTGAAATA TATGACGAAG
CTCCGCGATA AGGCAGAAAA GGAGACCGGT GAGAAAAAAT CGGCATTTCT CAACATTTCT
GCCGATGTGG AGACGATGAA GAAGCGGGCC GACCTGCTCG TTGAGTACGG CTGGAACTAC
GCGATGATCG ATGTAGTAGT TGCCGGAACC GCGAGCGTCA TGACGATGCG GGACTACTGT
TCCGATCTCG GCCTTGCGAT CCACGCCCAC CGCGCATTTC ATTCGGCATT CGATCGGAAC
AAAAAGCACG GGATGACTAT GTACTTCCTC GCAAAGCTCA TGCGCCTGAT AGGGGTCTCC
CAGATCCATA CCGGGACCGC AGTGGGCAAG CTTACCGGGA CAAAGACCGA ATCGATTCTT
CTTGCCGATC TCCTGCGAAA GCAGAAGATA CAGGAAGTCT CCCACCAGTG CCTTGCTCAG
GACTGGGGAA CGATAAAGAC GGCATTCCCG GTCTCATCCG GCGGCCTGCA CCCGGGCCTT
GTTCCCGATG TGCTCGATAT CTACGGCACG GATCTTGTGC TGCTTGTCTC CGGAGGTATC
CACGGCCACC CGAAAGGAAC CAGGGCCGGG GCAAAGGCGA CCATGCAGGC GATCGAGGCA
TGGCAGGAAG GGATCACGCT CGATGAGAAA GCAAAAAAAG CAAAGGAACT CAAAGAGGCC
CTTGCCAAGT GGGGCTACTA CAAACCGAAG TGA
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| Protein sequence | MAIDWYNEFV DPNYKPANDD LVCLFYFEPA AGITDKEAAG RIASESSTGT WTTLATLPPR
MKKLEAKAFE FDGHYVKVAY PLALWEEGNA VQLLSGIAGN IFGMKALKNL RLIDATLPSA
YTREFKGPHF GMDGIRKMMG IRGRPLTGAV PKPKIGFSAK EHAEIGYETW MGGFDFVKDD
ENLTSTSFNR FDDRVKYMTK LRDKAEKETG EKKSAFLNIS ADVETMKKRA DLLVEYGWNY
AMIDVVVAGT ASVMTMRDYC SDLGLAIHAH RAFHSAFDRN KKHGMTMYFL AKLMRLIGVS
QIHTGTAVGK LTGTKTESIL LADLLRKQKI QEVSHQCLAQ DWGTIKTAFP VSSGGLHPGL
VPDVLDIYGT DLVLLVSGGI HGHPKGTRAG AKATMQAIEA WQEGITLDEK AKKAKELKEA
LAKWGYYKPK
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