| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1101 |
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| Symbol | |
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| ID | 5411261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1094402 |
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| End bp | 1096474 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640868327 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001404262 |
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| Protein GI | 154150644 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.770779 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGAGC ACCAGGAAGA AATCTCAAGG ATCCGTGAAG AACTTGAGCA GCACCCGGAA
GGGCTGAGTA TTACTGATAT AGCCGGCCTG CTCGGTCTTA ACCGTAATTC AGTTGCCAGG
TACATGGACC TCCTGCAGAT CCAGGGCCTG GCTGACGGGA GGAAACGCGG AACCTCCAAA
GTCTATTACC GGTCCCGCCG GGTTCCCGCA GATTCCCTTA GGGAGATCTG CTTCCAACCG
TTTGTCACGT TCGATCAGGA TGGGGTTGCG ACTGATTACA ACCCGGCTTT TTCCCGCTTT
GCCGGTCTTT CCCGTGAACA GATCCTGGGC AGGGCGCTTG ATACCTTTCC TTTCCGGATA
CCGGAGGGTG GTACGCTCCA GCAGGTATTC CGTACCGCAT TCAAGGGCGG GGAACAACAA
GTGCAGGCAT CTCTTCTCAT CAAAGGTGAA GAACATTCCC TCCGCCTGAT CCTTGTTCCT
CTTGTGTTTG CAACCGGAAA ACCGGGTGTC GCGGTTATTG CCGACACGGA TCGTGGGGAA
GCAGCGGTGG GTCAGAACCC TCAATCCCCG TTCCCTGAAT TCCAGAAACT TCTCGATCAC
CAGGTTGAAT ACGTTGTCCG GTACAGCCCC GAGGGCATCA TCCTCTATGT CAACGAACCC
TACTGCCGCG CCATGGCGCG ATCCCGCGAA GACCTGATCG GGAGGCCGTT CAAGCACCTG
GTCCCGGGAG AGGATACCGA ACGGATCGCT GCCAACCGCG CACGGCTCAA CCCGAAGTAC
CCGGCAGGCA TGATCGAGTT TCGTGCCATC ATGGCAAACG GCGAGGCGCG CTGGCAGCGC
TGGTGGGACC ATGCCCTCTT TGACGATCGC GGGCAGCTGG CGGGTTATTT TTCCTGCGGC
CTGGATATCA CCGAAGAAGT CATGGTCAGG GGAAAACTCA AAAAAACCCA GGATATGCTC
GAGGAGACAA TTATTGCACG GACAAACGAA CTCCGCGAGA TCAACCGGCA GCTCTATGAC
GAGATGACGC GGAGGGAAAC CATGGAACAG CAGCTCCTCA TGACCCAGTT TGCTATGGAT
AACGCGGCGG ACATGGTGTT CTGGATCAAC CGCAACGGTG TTGTGGATTA CGCAAACAAG
GCTGCTGTAG AAGGCGGGGG CTATTCTGCT GTTGAACTCG CCGCTACGGG GCTTGGCGAT
CTTTTTCCCC TGCCCTCCGC ATATTCCTGG AACAATGTCT GGGATCATCT CAAGCGCGAA
GGAACGATAC AACAGCAGAT TGAGATGATA AAAAAAGACG GGACCAGGAT ACCGGTGGAG
ATAGTTCTGC GGTATCTTGC ATATCACAAA AGCGAGTTTG TATGCTGTTT TGTCCGGGAC
GTGTCCGAAC GGAAGCGGAT GGAGCATACC CTGCACCTGG CAAACCGGAA ACTCAACGTG
CTTGCCAGCA TCACCCGCCA CGATATCCAG AACAAGGTAA CGGTCCTGCT GGGCTACCTG
ACCCGGGCAA GAAAACGGGA GACGGACCCG GAGATCCGGG AATATCTCGA TCGGCAGGAA
CGGGCTGCAA AGGCGATCCG GGACGAGATC TCCCTTACCC GGGATTTCAA GGACCTGGGG
ACTGATTCCC CCGAATGGCT TAATATCCGG GATCTGGTGG GTGCAGCTGC AAAAAGGTTC
GGGGATTCTG CACCCCGTTT CTCCCTTGAA CTTCCCGAAA ATCTTCTCGT GTATGCGGAT
CGCCAGATCG AACGGGTGTT CTTACGGCTG TTTGAGACTG CCTTAAATTC CCCCTCGCCC
CCGCAATCGA TCCGGATATT CTCGCGCGGG GATCAGGACA GGATCGTGAT CTGCGTAGAG
CATGAAGATG CCGCAATTAT GGCAGAAGCG ACCGCGAAAA ACCCGGCAGC TGCTGAAGAG
GATATGGGAG AGCGAAGCCT TGCCATTATC AGGGAGATCC TCTCCCTGAC CGATATCACC
CTTGAAAAAA CCGGGGAGCC GGGAAAAAGT GTTTGCTACG AGATAGTTAT TCCTGCCGTT
TCCTATCGCT ACTCTTCGCG GATAGAGGAT TGA
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| Protein sequence | MQEHQEEISR IREELEQHPE GLSITDIAGL LGLNRNSVAR YMDLLQIQGL ADGRKRGTSK
VYYRSRRVPA DSLREICFQP FVTFDQDGVA TDYNPAFSRF AGLSREQILG RALDTFPFRI
PEGGTLQQVF RTAFKGGEQQ VQASLLIKGE EHSLRLILVP LVFATGKPGV AVIADTDRGE
AAVGQNPQSP FPEFQKLLDH QVEYVVRYSP EGIILYVNEP YCRAMARSRE DLIGRPFKHL
VPGEDTERIA ANRARLNPKY PAGMIEFRAI MANGEARWQR WWDHALFDDR GQLAGYFSCG
LDITEEVMVR GKLKKTQDML EETIIARTNE LREINRQLYD EMTRRETMEQ QLLMTQFAMD
NAADMVFWIN RNGVVDYANK AAVEGGGYSA VELAATGLGD LFPLPSAYSW NNVWDHLKRE
GTIQQQIEMI KKDGTRIPVE IVLRYLAYHK SEFVCCFVRD VSERKRMEHT LHLANRKLNV
LASITRHDIQ NKVTVLLGYL TRARKRETDP EIREYLDRQE RAAKAIRDEI SLTRDFKDLG
TDSPEWLNIR DLVGAAAKRF GDSAPRFSLE LPENLLVYAD RQIERVFLRL FETALNSPSP
PQSIRIFSRG DQDRIVICVE HEDAAIMAEA TAKNPAAAEE DMGERSLAII REILSLTDIT
LEKTGEPGKS VCYEIVIPAV SYRYSSRIED
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