Gene Mboo_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1097 
Symbol 
ID5410022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1090399 
End bp1091052 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content56% 
IMG OID640868323 
ProductexsB protein 
Protein accessionYP_001404258 
Protein GI154150640 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.176063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG TTCTTATTCT TTCAGGCGGG ATGGACAGCA CCACCCTCCT CTACGATCTC 
ATCGACCAGG GATACGAGGT CAGTGCGATC ACGTTCGATT ACCACCAGAA ACACAAAAAA
GAGATCGCGT GCGCACAAAA GACCTGTGCA AAACTCTCCA TTCCCCACAA AATTGTCAAC
CTCTCGGTGC TCAACGATCT TGCACCGTCC AGCCTGACCC GGGCCGACCG GGACGTTCCC
GAAGGCCATT ATGCAGAAGA GAGCATGAAA CAGACGGTGG TCCCGAACCG GAACATGGTC
TTTTTGAGCC TTGCCGCATC CTATGCCATC GGCATCGGGG CCGGTCACCT GTTCTACGCG
GCACATGCCG GGGACCATGC AATCTACCCG GACTGCCGCC CGGTTTTTGT GAGTGCCATG
AGCACCGCAT TCCATCTCTG CGACTGGAAC GATCTGGTGC TCCAGGTGCC CTATCTCATG
CTCTCCAAGG GTGATATCGC AAAAAAAGGG ATCGGTCTTG GGGTTGATTA CGCCAATACC
TGGTCGTGCT ACAAGGGCAA AGAGCGCTCA TGCGGAAAAT GCGGGGCCTG CACCGAACGC
CTTGAGGCAT TCCGGGAAGC AGGTGCCGCC GATCCGCTGG AATACGAACC GTAA
 
Protein sequence
MKAVLILSGG MDSTTLLYDL IDQGYEVSAI TFDYHQKHKK EIACAQKTCA KLSIPHKIVN 
LSVLNDLAPS SLTRADRDVP EGHYAEESMK QTVVPNRNMV FLSLAASYAI GIGAGHLFYA
AHAGDHAIYP DCRPVFVSAM STAFHLCDWN DLVLQVPYLM LSKGDIAKKG IGLGVDYANT
WSCYKGKERS CGKCGACTER LEAFREAGAA DPLEYEP