| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1095 |
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| Symbol | |
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| ID | 5410020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1089138 |
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| End bp | 1089926 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640868321 |
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| Product | Linocin_M18 bacteriocin protein |
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| Protein accession | YP_001404256 |
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| Protein GI | 154150638 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1659] Uncharacterized protein, linocin/CFP29 homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.236732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAATG TATATCTCGG ACGCGACGAG GCACCCATTG GTGCAGAGTC CTGGAAACTG
ATCGATGATG TGGCAGTCCA GGCAGCAAAA GGCCAGCTTG CCGGGCGCAG GCTGCTTGCA
ATCGAAGGGC CGTACGGATT CGGGCTCAAG GCAATTCCCC TTGGGGACTA TGCCCTTGAG
GACGGGATTA GCGCGAGCGT CTCGCTCCCG CTCTCCCTGA TCCGGACCGA GTTCTCGCTG
GGCAAGCGCG ATCTTGCGGC CTATGAACGC GATCACCTCA TCCTTGACAC GGCCCCGGTG
GCCTGTGCAG CCATGGATGC AGCGGCAAAG GAGGACCGGA TCATCTTTAA CGGCCTTGCC
GGGACCCCGG GCCTCCTCAA CGCGGAAGGT GCCGGATCGC TCACCCTTTC AAAGTGGGAC
AAGGTCGGAG CCGCTGCAGA CCAGATTATC GATGCGGTGA CCAAACTCGA CGCAGCAGGA
TTCCACGGGC CCTACAGCCT TGCACTTGCG CCGGCCCAGT ACAACCTCCT CCTCAGGCGG
TACCCGCAGG GAGACGGGAC CGAGCTCGAC CACGTCTCGT CTATTGTGGG CGACGGTGTG
ATTAAGGCCC CGGTACTCAA GAAGGGTGGC GTGCTCGTTG CCTCGGGCAG CCAGTATGCC
TCGGTTGCGC TTGGCCAGGA TCTCGCAGTC GGGTATAATG GCCCGGTCGG GGATCTCTTG
GAGTTCCAGA TCTACGAGAG CCTTGCGCTC ATTGTCCGGG CACCTGAATC CATCCTCGTG
CTCAAGTGA
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| Protein sequence | MANVYLGRDE APIGAESWKL IDDVAVQAAK GQLAGRRLLA IEGPYGFGLK AIPLGDYALE
DGISASVSLP LSLIRTEFSL GKRDLAAYER DHLILDTAPV ACAAMDAAAK EDRIIFNGLA
GTPGLLNAEG AGSLTLSKWD KVGAAADQII DAVTKLDAAG FHGPYSLALA PAQYNLLLRR
YPQGDGTELD HVSSIVGDGV IKAPVLKKGG VLVASGSQYA SVALGQDLAV GYNGPVGDLL
EFQIYESLAL IVRAPESILV LK
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