| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1092 |
|---|
| Symbol | |
|---|
| ID | 5410017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1085748 |
|---|
| End bp | 1087103 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640868318 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_001404253 |
|---|
| Protein GI | 154150635 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0412103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACACGA CCCCCACATC CATCGCACGT ATCGCCCCCG GATCGCCGGA GAATCCCCTG
ACCCTGCTCA GGAAATACTG GGGTTATCCG GCATTCCGCC CGCACCAGGA AGCGATCATT
GCCTCCATCA TCGGGCACAA CGATACGCTT GCGATCATGG CAACCGGCAG CGGGAAATCG
CTCTGCTACC AGCTGCCGGC GGTGTATCTT GGCGGCCTTA CGATCGTGAT CTCGCCGCTT
CTTGCGCTCA TGAAAGACCA GGTGGATGCG CTCAATGCCC GGGGCATCCC GGCCGCCGCG
TGGAACAGCC TGCTCGATTC GGCCGGGCGC AGTCGGATCG AGGCGGCGAT GCGGGACGGA
AGGCTCCGGA TCCTCTTTGT CTCACCGGAG AAATGCCTGC AGCCGGGATT TCTCGAATTC
CTGCAGGAGT TTCCGGTCCG GCTCGTTGCC ATTGACGAGG CGCATTGCAT ATCGGAGTGG
GGCCATGATT TCCGGCCCGA GTACCGCGAC CTTGCCCGGC TGCGGAAATG CTTCCCGTCC
GCACCCGTCA TCGCGCTCAC GGCCACGGCA GTTCCCGAAG TGCGAAAGGA TATCAGCCGG
CAGCTCGGCC TTGTAAAGCC CCAATCGTTC GTGGGCAGTT TCTGCCGGGA GAATCTGGAG
TACCGGGTGA TAAAGAAGAA GAACCCGTTA GTCCAGCTGG CAGACATCTG CTGCCGGCAC
AAAAACGAGT CCGGCATTGT GTACTGCTTA AGCAAGAAAG AGACCGAGGA GTGCGCAGCC
GATCTCAAGA AGCGCGGCTT TACGGCGCTT GCGTACCATG CCGGCCTATC CCGTCCGGTC
CGGGAGGCCG TGCAGGACGC GTTTCTCAAA AATACCTCCC GGATCGTCTG CGCCACAGTT
GCATTCGGCA TGGGCATTGA CAAACCCGAC GTGCGGTTTG TGGTCCATTA CGATCTCCCC
AAGTCTGTTG AGGGCTACTA TCAGGAGACC GGGAGGGCCG GGCGGGATGG GAAGCCTGCT
GAATGTGTCC TGCTCTACAG CCGGGGGGAT GCAGTCCGGA TCCGGTATAT GCTTGACCAT
GACGGTGCGG GTGAACAGGC ATCCCGGATA GCGCAAAAGA AACTCCGGGA CATGACGGGA
TACTGCGAGA CAATCGGCTG CCGGAGAAAT TTCCTCCTCG CGTATTTTGG CGAACAGCCG
GCCCGGAAAA ACTGCGGGTC CTGCGATGCC TGCACCGGGA AAGTTCCCGG AACCGAAGGA
AAGATCCGGT CCCGGCGTTC CCCAAAACGA TCCGGGAGTG CCGCACCGGT TGGCGTCACG
ATCCCACGGC GCACTTACCC GATCCCGAGC GTTTAA
|
|---|
| Protein sequence | MNTTPTSIAR IAPGSPENPL TLLRKYWGYP AFRPHQEAII ASIIGHNDTL AIMATGSGKS
LCYQLPAVYL GGLTIVISPL LALMKDQVDA LNARGIPAAA WNSLLDSAGR SRIEAAMRDG
RLRILFVSPE KCLQPGFLEF LQEFPVRLVA IDEAHCISEW GHDFRPEYRD LARLRKCFPS
APVIALTATA VPEVRKDISR QLGLVKPQSF VGSFCRENLE YRVIKKKNPL VQLADICCRH
KNESGIVYCL SKKETEECAA DLKKRGFTAL AYHAGLSRPV REAVQDAFLK NTSRIVCATV
AFGMGIDKPD VRFVVHYDLP KSVEGYYQET GRAGRDGKPA ECVLLYSRGD AVRIRYMLDH
DGAGEQASRI AQKKLRDMTG YCETIGCRRN FLLAYFGEQP ARKNCGSCDA CTGKVPGTEG
KIRSRRSPKR SGSAAPVGVT IPRRTYPIPS V
|
|---|
| |