Gene Mboo_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1087 
Symbol 
ID5411692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1080334 
End bp1081461 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content53% 
IMG OID640868313 
Producthypothetical protein 
Protein accessionYP_001404248 
Protein GI154150630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.344662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACA GGTATTTTCT CTCAAGAACC GGATTTATAT CCGCGATCAT TTTCCTGCTG 
CTTATGGCAG CCTGCCCGGT GATGGCCCAT GAGGTGTGGA CTACAGGGAC CGTGGATATG
ACTTCAAGCG ATGTCGGCCA GCACAATTCC CTGGCAATAG ATCCGGCCGG TAACCCGCAT
ATCAGTTATT ACGATGATGA GAACAAGCAA ATCAGGTATG CAGCCGTAGT TGATGGCAGC
TGGACTAATG GAGCCGTAGC CGATTCCCGC TCAACCCACA CAACGTCACT GGCCCTGGAC
CCGGAAGGGA ACCCCGGGAT AAGTTACGGT GACGGCGACC ATGACGGGAA GCTGATGTAT
GCGCACCTGA ACGGGGGCTG GACCACCGAA ACGGTTGCAA GCGACTCCGG TCATGCAGAC
ATTGGTACTT ATTCCTCGCT CGCTATCGAT TCCGCCGGTA CGCCGCATAT ATCGTACAAC
AACGGAAAGG GAAATTATGA CACCCTCCTT GAGTATGCAA CAAGGAACGG CACCGTCTGG
ACAAGTGTAA CACCGGATCC TAAAATTCTC GGGTACGATT CGTCGATGGT ACTGGACTCA
TCCGGATTGC CGCACATTGC ATACCTCAAT GGCATGGATT CCGGTTACAT TGCATACGGG
TACCAGGATA CTCCCGGGAA GTGGAGCACA AGAATGGTGG CAAACACAGA GGGCAGAGGC
GGAGACATGG CAAAGAATGC CGGGTGCATC CTGTCACTTG CACTGGACTC TGAAAAGAAC
CCGCATATCG CCTACTTTGA TAAGACCCGT AAGGAACTCA TGTATGCATT CTGGGACGGG
AAGGAATGGA TCACGGAGAT CGTAGACCAG GATGGGGATA CCGGATGGCA TCCGTCGCTT
GCCATGTATC ATGACCAGCC CTCCATCAGT TACTACGATA TCTCAAGAGG GGAACTGCGC
TTTGCCACCC GGGATCAGGC TACACAGAAA TGGGTGCCAA GTACGGTTGA CAAAGGCGGG
GTTGGCTCTG ATTCCTCCCT CGCGTTTGAC TCCACCGGTA ATCCGGGGAT CGCGTATTAC
GACGGGAAGC ATCATGCACT GAAGTACGCA AGCGGGAAAC CACTGTAA
 
Protein sequence
MKYRYFLSRT GFISAIIFLL LMAACPVMAH EVWTTGTVDM TSSDVGQHNS LAIDPAGNPH 
ISYYDDENKQ IRYAAVVDGS WTNGAVADSR STHTTSLALD PEGNPGISYG DGDHDGKLMY
AHLNGGWTTE TVASDSGHAD IGTYSSLAID SAGTPHISYN NGKGNYDTLL EYATRNGTVW
TSVTPDPKIL GYDSSMVLDS SGLPHIAYLN GMDSGYIAYG YQDTPGKWST RMVANTEGRG
GDMAKNAGCI LSLALDSEKN PHIAYFDKTR KELMYAFWDG KEWITEIVDQ DGDTGWHPSL
AMYHDQPSIS YYDISRGELR FATRDQATQK WVPSTVDKGG VGSDSSLAFD STGNPGIAYY
DGKHHALKYA SGKPL