Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_1078 |
Symbol | |
ID | 5411683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | - |
Start bp | 1068582 |
End bp | 1069157 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640868304 |
Product | RDD domain-containing protein |
Protein accession | YP_001404239 |
Protein GI | 154150621 |
COG category | [S] Function unknown |
COG ID | [COG1714] Predicted membrane protein/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.30777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCTG CATTTCCGGG AACGACCCCG TTGCCGGACC CCGTCCCCGC AACCGAAACC CAGTCCCCCC CGGCAGGGGA TGAAGAGCGC CCTCGGCTGG AACCCGCAAA GACCCTGCAC CTGGCAAACT GGTCTACCCG TTTCTGGGCC TGGCTGATCG ATGTCATCCT GATCGTCCTG TTCCTCAATA TCATCCGCGG CATCCTAGAA CCGTTCTGGA CCCTTCATTT TCTCTGGGAC TACCAGCACT GGGGCATCTT CGATCTCGGG CTTGAGACAC TCTTCTTCTT CCTGTACTGG ACCATATTTG AGAGTTACAA AGGGCAGTCG ATCGGAAAGA TGGTGCTCAA CATCCGTGTC GTGAACCGCG ATGGGACACG GATCCACTGG GGGACGGCCG CCATCGAAAG CCTGGGCAAG GCATTTATCC CGATCCTTGC ACTCGACTGC CTGATCGGGT GGCTTGCCAT GCCCGAGACC AAGCTGAGGG TCTTTAACCG GATTTCCAAC ACCATTGTGA TCAAGACCGA TTACCGGGAG CCTGAAGGTA TCCAGTACGT AAAAGAAAAA GAGTAA
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Protein sequence | MAAAFPGTTP LPDPVPATET QSPPAGDEER PRLEPAKTLH LANWSTRFWA WLIDVILIVL FLNIIRGILE PFWTLHFLWD YQHWGIFDLG LETLFFFLYW TIFESYKGQS IGKMVLNIRV VNRDGTRIHW GTAAIESLGK AFIPILALDC LIGWLAMPET KLRVFNRISN TIVIKTDYRE PEGIQYVKEK E
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