Gene Mboo_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1078 
Symbol 
ID5411683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1068582 
End bp1069157 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content56% 
IMG OID640868304 
ProductRDD domain-containing protein 
Protein accessionYP_001404239 
Protein GI154150621 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.30777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTG CATTTCCGGG AACGACCCCG TTGCCGGACC CCGTCCCCGC AACCGAAACC 
CAGTCCCCCC CGGCAGGGGA TGAAGAGCGC CCTCGGCTGG AACCCGCAAA GACCCTGCAC
CTGGCAAACT GGTCTACCCG TTTCTGGGCC TGGCTGATCG ATGTCATCCT GATCGTCCTG
TTCCTCAATA TCATCCGCGG CATCCTAGAA CCGTTCTGGA CCCTTCATTT TCTCTGGGAC
TACCAGCACT GGGGCATCTT CGATCTCGGG CTTGAGACAC TCTTCTTCTT CCTGTACTGG
ACCATATTTG AGAGTTACAA AGGGCAGTCG ATCGGAAAGA TGGTGCTCAA CATCCGTGTC
GTGAACCGCG ATGGGACACG GATCCACTGG GGGACGGCCG CCATCGAAAG CCTGGGCAAG
GCATTTATCC CGATCCTTGC ACTCGACTGC CTGATCGGGT GGCTTGCCAT GCCCGAGACC
AAGCTGAGGG TCTTTAACCG GATTTCCAAC ACCATTGTGA TCAAGACCGA TTACCGGGAG
CCTGAAGGTA TCCAGTACGT AAAAGAAAAA GAGTAA
 
Protein sequence
MAAAFPGTTP LPDPVPATET QSPPAGDEER PRLEPAKTLH LANWSTRFWA WLIDVILIVL 
FLNIIRGILE PFWTLHFLWD YQHWGIFDLG LETLFFFLYW TIFESYKGQS IGKMVLNIRV
VNRDGTRIHW GTAAIESLGK AFIPILALDC LIGWLAMPET KLRVFNRISN TIVIKTDYRE
PEGIQYVKEK E