Gene Mboo_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1070 
Symbol 
ID5409798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1062335 
End bp1062865 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content55% 
IMG OID640868296 
ProductTM2 domain-containing protein 
Protein accessionYP_001404231 
Protein GI154150613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.607501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATGG TATGCCCGCA CTGCGGTAAA ATATCTGATG AGGCATCCCC CCGTTTCTGC 
AGCGGATGCG GTACCCGCAT GGACGGGAAA GCCCCGGCCG GATATCCCGT ATATGGTGGA
TATTCTGTGC CGGTTCCGGC GCGGGAGCAG AAGAGTACAT TAATCGCCGG GGCCTGTTCT
ACGCTCCTTC CTGGTCTCGG GCAGGTCTAC AACGGGCAGA CGGCAAAGGG CTTTGCCCTC
TTTATTGCGA CCTGCGTGGG TCTGGTCATC CTTCTCATTC CCGGTCTTAT CGTCTGGCTC
TATGCAATGT ACGATGCGCA TAAAACGGCA GGAAAGATGA ACACCGGTGA GATCCCGTTT
TGCGAGATGC GGATGCTGCA TGTGGTCCTT TTTGTCGTGT TTGCCATAGC CGTTGTTGTC
ATCGGGCTCG TACTTATCTA TGTCATGGTC GTCGAGCCCA TGATGTCACA GTTTTCCTCG
CTGGACACGG GTAATTTTAA CCAGCTCCTC AACACGGGCG GAGCTTTTTA A
 
Protein sequence
MPMVCPHCGK ISDEASPRFC SGCGTRMDGK APAGYPVYGG YSVPVPAREQ KSTLIAGACS 
TLLPGLGQVY NGQTAKGFAL FIATCVGLVI LLIPGLIVWL YAMYDAHKTA GKMNTGEIPF
CEMRMLHVVL FVVFAIAVVV IGLVLIYVMV VEPMMSQFSS LDTGNFNQLL NTGGAF