| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1064 |
|---|
| Symbol | |
|---|
| ID | 5410900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | + |
|---|
| Start bp | 1052570 |
|---|
| End bp | 1053772 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640868290 |
|---|
| Product | S-adenosylmethionine synthetase |
|---|
| Protein accession | YP_001404225 |
|---|
| Protein GI | 154150607 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1812] Archaeal S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.329658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.097531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA ATATCCAGAT CGAAGCGTTG AATCAGATTC CCCTTGAAAA GCAGCGGATT
GAACTTGTTG AACGCAAGTG CCTCGGCCAC CCCGACAGTA TTGCCGATGG AATAGCTGAG
TCGATCTCCC AGGCGCTCTG CCGGGAGTAC CTCAAGGAGT TCGGGGCCGT CCTCCACCAC
AACACCGACC AGGGTGAGGT TGTTGCCGGG GAATCGTGCC CGAAGTTCGG CGGGGGGAAG
ATGATCCGCC CGATCTACGT GCTTATCGAC GGCCGGGCCA CCAAGCAGTT CAACGGCGTC
ACCATCCCCA CCGATACGGT TGCAGTCGAA GCTGCACACG AGTACCTGCA TAAGATCCTT
CCTGAACTCA ACCTGCAGCG CGATGTTATG ATCGACAGCC GGCTCGGGAC AGGTTCTACC
GATCTGCGGG ATGTCTTCAA GCCCCGCCAG GGAAAAGTCC CGCGCTCCAA CGATACCTCG
TTTGGTGTCG GGCATGCACC GTTCTCCGAT GTAGAGACCA TTATCCGGAA TACGTCCGAG
TATATCGATA CCAAACTCCG CAAGAAATAC CCGGCCATCG GCCAGGACAT TAAGATCATG
GGCCTGCGGG ACGGGAACAC GATTACGCTG ACCGTTGCCT GCGCTATTGT CGACCGGTAC
TGTGCGGACA TCAGGGAGTA CCAGGAATAC ATGGGCCTCC TGACCGAAGA GATCGGTAAA
GTGGCAAAGA AGAGCACCAA GCGCAAGGTT GTCGTAAATC TCAACACCGC AGACGATATC
AAGAGTAAGA GCGTGTTCCT GACCGTCACT GGCACATCGG CCGAGATGGG AGATGACGGC
TCGGTAGGTC GGGGTAACCG CTGCAACGGG CTTATCACCC CTAACCGTCC GATGAGCATG
GAGGCGACAA GCGGCAAGAA CCCGATCAAC CATATCGGGA AGATCTACAA CCTCCTCTCA
ACACAGATTG CACAGGAATC GATCAAAAAG GTCGACGGTA TCGAGGAGAT GTACGTCCGC
CTGCTCTCCC AGATCGGAAA ACCAATCGAC CAGCCACTTG TTGCAAGTGT CCAAGTGCTG
CCAAGAAAAG GTGTCACCCT CCAGGAGATC AACGGCGAGA TCCAAGCGAT CGTTGACGAC
AATCTTGCCA ATGTTACCAG CATCACGGAG AAGGTAATCC GTGGCGAACT CAAGACCTTC
TAA
|
|---|
| Protein sequence | MKRNIQIEAL NQIPLEKQRI ELVERKCLGH PDSIADGIAE SISQALCREY LKEFGAVLHH
NTDQGEVVAG ESCPKFGGGK MIRPIYVLID GRATKQFNGV TIPTDTVAVE AAHEYLHKIL
PELNLQRDVM IDSRLGTGST DLRDVFKPRQ GKVPRSNDTS FGVGHAPFSD VETIIRNTSE
YIDTKLRKKY PAIGQDIKIM GLRDGNTITL TVACAIVDRY CADIREYQEY MGLLTEEIGK
VAKKSTKRKV VVNLNTADDI KSKSVFLTVT GTSAEMGDDG SVGRGNRCNG LITPNRPMSM
EATSGKNPIN HIGKIYNLLS TQIAQESIKK VDGIEEMYVR LLSQIGKPID QPLVASVQVL
PRKGVTLQEI NGEIQAIVDD NLANVTSITE KVIRGELKTF
|
|---|
| |