Gene Mboo_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1063 
Symbol 
ID5410899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1050975 
End bp1052423 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content61% 
IMG OID640868289 
Producthypothetical protein 
Protein accessionYP_001404224 
Protein GI154150606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.232728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.148136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT GTCCGCATTG CGGGATGAAT ATCCGGGATA ACGTCGAGGT CTGCGGGTAC 
TGTGGAGGTG AGATCGTCTC ACGGCCGCAG GGCGCTGGGG TAAAGGGAGC TGCGGCCCAG
AACCGGAATG TCCCGCCCCG GGTTGCCCAG AAGGCACCTG TCGCTCCCCC TGCGGATGCC
GCAGACGGGG TTGAAGGCGA AGAAGAAGAG GGCGGGGGAC TCTCGAAGAT CCTCCAGCCC
GGGGAACAGG TGCTGATCGG GTCCCTGAAT GTCTCGGTAA AAAAATTCTT TTTCCACGCG
TATCTCACCA ACAAGCGTAT CTTCCTGATC GATACCCAGG AAAAGAAACT CAAGGTCACG
GCAAAGGACA TCCCTCGTGA AACGATTGCC GATAGTATTG TGGAGTATTC GGAAAATGCC
GACCCGGTGC TTGTACTTTC GGTAAAATCC TCTGATGATG ATGTCAAGAC CATGAAACTG
GTCTTTTCCC AGAACGGGTC CGACCGTACC GGAGAGATCG ATGACTGGAT AGCCCTGCTT
GGCCGTGAAC CTGAGGCAAA GAAGCCTGGC AGGCAGGCAG CCTCGCCTCA GAAAGCATCC
GAACCCGAGC CCGAACCAGA AGAAGAGTTC GTACAGGAAG TGGAGCCGGA AGAAGAGGAG
TCTCTTCCTG CACCACGGGC GGCAAAATAT CCGGTCCGCC AGGAGGCGTT GCGCCCGTCG
CGAAAACCCC TCAAGGAACA TGAACGCCAG CCCCCGGTAA AACGGCTTAT CCCCCTGGCC
CGTGAACCGG AACCAGAGCC CGAACCCGAA CCTGAACCCC TGCCCCCGGT CCAGCAGCCC
CAGAGGAGGG TTCAGGTAAA GTCTGTTGAG GAGCCGCAGC GCAGGGTGCC TGCTGTACGT
GGTGTACCTG CACCTGTGAG AGGTGACACC CAGCCGGTCA GGAAACCGGA AAGCCAGACT
GCCGTGCGGG CGGCGATGAA CTCCCCGGTA CAGCCGTTGC GGCAAACCAT GGTCCAGCCG
GCAAAGAGTA GTATCTCGGA ACCGGTCCGC CGCCCCCTGC CGGATGCAAC CCGGGAAACA
CTGTCCGATG AACGCCCGGT AGTACGGAAG GCCGCAGTCC CTGAGGTACC GGCGGATGCC
CCGCAGTTCT GCCATAACTG CGGGAAGAGA CTACCCGGCG AGGCCAACTT CTGTCCTGGC
TGCGGGACGC GTCTTGGGCG TTCGCGGACC GATCCGGCGG CCGCAGCCCG TGCTTCAAAG
ACCCTGCCCC GTCCTGTGGC AGCAGTCGCC CCTCCGCCTG CTCCTCCGTC TGCGGCCCAG
CGCCGCGTCC CCCGGATAGA AGAGATTAAT GAAGATGAAG ACGAGGAGGT CCAGCCACGG
CGGCCCCCGG TCAAAAAGAC CCCCAAGGGC AGTGACATGA CCATCCTGCA GAAATTCCTC
CGGCGCTGA
 
Protein sequence
MKKCPHCGMN IRDNVEVCGY CGGEIVSRPQ GAGVKGAAAQ NRNVPPRVAQ KAPVAPPADA 
ADGVEGEEEE GGGLSKILQP GEQVLIGSLN VSVKKFFFHA YLTNKRIFLI DTQEKKLKVT
AKDIPRETIA DSIVEYSENA DPVLVLSVKS SDDDVKTMKL VFSQNGSDRT GEIDDWIALL
GREPEAKKPG RQAASPQKAS EPEPEPEEEF VQEVEPEEEE SLPAPRAAKY PVRQEALRPS
RKPLKEHERQ PPVKRLIPLA REPEPEPEPE PEPLPPVQQP QRRVQVKSVE EPQRRVPAVR
GVPAPVRGDT QPVRKPESQT AVRAAMNSPV QPLRQTMVQP AKSSISEPVR RPLPDATRET
LSDERPVVRK AAVPEVPADA PQFCHNCGKR LPGEANFCPG CGTRLGRSRT DPAAAARASK
TLPRPVAAVA PPPAPPSAAQ RRVPRIEEIN EDEDEEVQPR RPPVKKTPKG SDMTILQKFL
RR