| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1057 |
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| Symbol | |
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| ID | 5410893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 1041229 |
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| End bp | 1042578 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640868283 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001404218 |
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| Protein GI | 154150600 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0334247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.158346 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGG ATTACCAGCA GGAACTTGGC CAGATCAAGA ACCTTCTCAG GCAAAATCCG
GAGGGAATGA GCGTTACCGA TATTGCAAAA GCGCTCAAGA AGAACAAGAA CACGACCGGG
CGGTACCTGG ATATCCTGCT GATATCAGGA CAGGTGGACA TGCGGACGTA CGGCATGGCC
AAGGTCTTTA CTCTCTCCCA GCGCGTCCCG CTCTCTGCCA TGCTCAGTTA TTCAAAGGAC
CTGATCATGG TCCTTGACAA GGAATCCCGC ATCACCGATA TCAATGAAAA TTTTGCTACA
CTCCTGCGCA TTGCCCGAAA GGATGCCATA GGAAAAAATG TTGCTTATCT CAACTCCCCC
GAGGTAGATG TCCGCGATTT TATCCACACC CTCTCTGCGC CCGGCACCCG GGAATCGGAG
CGTATTGTTT CATTTGCAGT AAAGGGGTCC GGGGAACGGA TCTTCAAGCA GAAATCCGTT
CCCACGGTTT TTGATGATGG CCAAAGAGGC CTTACCATTA TCCTTTCCGA TGTAACTGAG
GAGATCGTAA AAGAGCGGGA GATCCGGGAG CGGGAAGAAC AGTTCCGGAT GATGGCTGAG
AATATCCAGG ACGGGCTGAT CATTTTAGAA AATGACCGGT GCACTTTTGT GAACCGGAGG
GTTGCTGAGA TCACCGGTTA TACCTTTGAA GAACTCTGGG CAATGGATCC CATGGCAACA
ATCATAGATC CCGAGGACCA AAAAAAGCTG GAGCCGATCC TTGAACTCCG CAAAAAACCA
GCCCAGGGAG TTACCGAGTT CCAGGGCCGT ATCCGGAGGA AAGATGGTGT TTTCCGGGAT
GTTTATCTCA GGACCACCAG CCTCAAGCAT GAAGAGACCT GGTTTGCGTT TGTTATCATG
ACCGATATCA CCGAGCTGCG GACCAAGGAT GCCGCACTCT TTGAAAGCGA ACAGCGGTTC
CGGATGATGG CAGAAAACAT CCAGGACAGC CTCTTTATTA TCGAGAACGA GCAGCTGGTC
TATTCCAACC GGCGTCTCAG TGAGATCACG GGATATTCGG GTGAAGAGCT GCTTGCGAAG
AGTCCCCGGG ACCTGATTGC TCCTGAAGAC ATGCAGCGGA TTGAGGAACT TTACACCAAA
TCCGTGGCCG GTGCCGGGCC GGCGCAGTTC CGGAGCTGGG TGCGGTGCAA AAACGGGGAA
AGCCGGTTTG TGTACGGCCA TATCAATTCT GTCAGCTCCG GCCAGACCGT GAGCACGTAC
ATCACCATGA CAGATATCAC GGAATTTGCA CAGCGCGAAC AGGCGCTGCA GGATCGTATC
CGGGAGCTGG AGAAGTCCAT CGGGCAATAA
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| Protein sequence | MMQDYQQELG QIKNLLRQNP EGMSVTDIAK ALKKNKNTTG RYLDILLISG QVDMRTYGMA
KVFTLSQRVP LSAMLSYSKD LIMVLDKESR ITDINENFAT LLRIARKDAI GKNVAYLNSP
EVDVRDFIHT LSAPGTRESE RIVSFAVKGS GERIFKQKSV PTVFDDGQRG LTIILSDVTE
EIVKEREIRE REEQFRMMAE NIQDGLIILE NDRCTFVNRR VAEITGYTFE ELWAMDPMAT
IIDPEDQKKL EPILELRKKP AQGVTEFQGR IRRKDGVFRD VYLRTTSLKH EETWFAFVIM
TDITELRTKD AALFESEQRF RMMAENIQDS LFIIENEQLV YSNRRLSEIT GYSGEELLAK
SPRDLIAPED MQRIEELYTK SVAGAGPAQF RSWVRCKNGE SRFVYGHINS VSSGQTVSTY
ITMTDITEFA QREQALQDRI RELEKSIGQ
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