| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1047 |
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| Symbol | |
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| ID | 5410181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1030043 |
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| End bp | 1031485 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868273 |
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| Product | homospermidine synthase |
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| Protein accession | YP_001404208 |
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| Protein GI | 154150590 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG5310] Homospermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.129007 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTA AAAACAAAGT ACTGATCATC GGGTACGGCG CAGTTTCCAA GTGTACGCTC
CCGATCCTGC TGCGTCACGT CAATATTCCG CTCGAGAATA TCACGATTGT TGATTTTAAA
GATAAATCCC AGGACCTCAA GGCCTATACG ACCCGGGGTC TCCGTTTCCT CAAACGGAAG
ATCACCCCGG AAAACCTTAC ATCGATTCTT ACAGAAACCC TTGGCGAGGG CGGTCTCCTT
GTCGATCTTG CCTGGAACAT CGATGCCGGC GAGATCGTCC AGTGGTGCCA TGACCACAAC
GTGCTGTACG TGAACACGTC CGTGGAGGCA TGGGACCCGC TGGGCGAGCG CTATACGGCA
AGCCCCGTAG AAAAATCCCT GTACTACCGG CAGATGAAAC TGCGGGAGCT GACCCGGGAA
TGGGCAGACT CCACAACCTG CGTGGTAGAT CATGGGGCAA ACCCGGGGCT TATCTCGCAC
ATGACCAAGC AGGGCCTTGT TGATATCGCC CATAAGATGA TCGAGGACGG GCTTGCAGAG
GATCCTGCGC GCTTCAAACG CCTCATCGCT GAGCAGAAAT TCAACGAGCT TGCCATGGAA
GTCGGAATCA AGGTGATCCA CTGCTCCGAG CGTGACACCC AGATCTCCCG GTTTCCAAAA
ATTGTGGACG AATTTGTCGG CACCTGGTGC ATCGAGGGGC TGCTCGAAGA GGGTACAGCC
CCTGCCGAGA TCGGGTGGGG TACCCACGAG AAGGAGCTGC CACCCGGTGC ACATGTGCCA
ACTGACGGCC CGAAAAACGC GATCATGATC CATCACATGG GGATCAACAC CTGGGTCCGA
TCCTGGGTGC CCGAGCAGGA GATCGTGGGC ATGGTGATCC GGCACGGCGA GGCATTCGGG
ATCTCCGACC GCTGGACGGT CTGGAAGGAT GGCAAAGCGA TCTACCGTCC GACCGTGAAC
TACGCGTACA TGCCCTGCGA TGCAACGATC GCCTCGCTCC ATGAACTGCG GGGGAGGAAC
TACGAGCTCC AGTCCCGGGT CCGTATCATG AACGACCGGG AGATCTCGGA AGGGTCCGAC
ATTCTTGGCG CACTTCTGAT GGGCCACCCG TATAACTCAT GGTGGACAGG GAGCATTCTC
TCGATTGAAG AGGCTCGAAA ACTTGCACCG GGCCAGAACG CAACCACGAT CCAGGTCGCG
CTAGGAGTGG TCTCCGCAGT GATGTGGATG ATCGAGAACC CGAAAAAAGG CTTCTGCCTG
CCTGACGACC TGCCCCACCA GTTTGTCCTG GATATTGCAA AACCCTACCT CGGGGAATTC
TGGTCCGGGC CCTCAGACTG GACTCCCTTA AAAAACCGGA CGGTCTATTT CCGCGAGAAC
CCGGATAACG ATTTCGACAG GGATGATGTC TGGCAATTCA AAAACTTCTT ATTTGTAAGA
TGA
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| Protein sequence | MDFKNKVLII GYGAVSKCTL PILLRHVNIP LENITIVDFK DKSQDLKAYT TRGLRFLKRK
ITPENLTSIL TETLGEGGLL VDLAWNIDAG EIVQWCHDHN VLYVNTSVEA WDPLGERYTA
SPVEKSLYYR QMKLRELTRE WADSTTCVVD HGANPGLISH MTKQGLVDIA HKMIEDGLAE
DPARFKRLIA EQKFNELAME VGIKVIHCSE RDTQISRFPK IVDEFVGTWC IEGLLEEGTA
PAEIGWGTHE KELPPGAHVP TDGPKNAIMI HHMGINTWVR SWVPEQEIVG MVIRHGEAFG
ISDRWTVWKD GKAIYRPTVN YAYMPCDATI ASLHELRGRN YELQSRVRIM NDREISEGSD
ILGALLMGHP YNSWWTGSIL SIEEARKLAP GQNATTIQVA LGVVSAVMWM IENPKKGFCL
PDDLPHQFVL DIAKPYLGEF WSGPSDWTPL KNRTVYFREN PDNDFDRDDV WQFKNFLFVR
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