Gene Mboo_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1037 
Symbol 
ID5412252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1020141 
End bp1021061 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content57% 
IMG OID640868263 
Producthypothetical protein 
Protein accessionYP_001404198 
Protein GI154150580 
COG category[S] Function unknown 
COG ID[COG2006] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.200288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.431859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC AAGGGCAGAC AGACATTTTT ATCGCGGATG CGACTGACCG TATCGGCGGG 
CTTCACGCAA TCCTTGAGGA GTTCGATCTC TCCGTATTGT CAGGAGCCGG CGTGGCTCTC
AAGGCAAATT TCAACAGTGA CGACCCATTC CCTGCTTCGA CACATATCGA TATGCTGCGG
GGGATTGCAG ATTCCATCCT GAACGAGGGG CCGGCACATC TCACGCTTGC TGAACGCAGC
GGGATGGGGG CGACAAGGAC CGTGCTTGAA AACCGTGGCG TATTCTCTCT TGCACAGGAG
CTCGGGTTTT CTGTTGTTGT GCTGGACGAG ATCGAACGGA ACGGCTGGCA GGAGATCCAG
GCGCCCGGGC TTCACTGGCA ACGGGGTTTT TTCATTGCCA ATGTCTTTAC CTGGGCAGAC
CGTGTTATAC AAACCTGCTG CCTCAAGACC CACCGGTACG GGGGACATTT CACGATGTCG
CTAAAAAATT CTGTCGGCCT TGTCGCAAAG CGGGTCCCCG GCCTTGATTA CGACTTCATG
GGCGAACTGC ACACCTCGCC CCACCAGCGG GCGATGATTG CCGAGATCAA CACATTTTAT
TCCACCGATC TCGTGCTCAT GGATGCGACC GAGGGATTTG CAACCGGCGG GCCGGACAAA
GGAAAACTCA TTCGCCCCAA CGTAATTATC GGCGGGCGGG ACCGGGTTGC CATCGATGCA
ACCGGGGTTG CACTGCTCCG CTCCTTTGGC ACGTCCCACG ATGTGAGCGA GGGAACAATT
TTCTCCCAGG AGCAGATCGC CCGTGCCTCT GAGTTAGGAA TAGGTGTTAC TTCCGCGGAT
CAGATCCGTC TTGTTCCGCT CGATGCAGCA TCAGAACCTG TTGCGGAAAA GATCCAGGCA
CAGCTCGATT CCGGGGTGTG A
 
Protein sequence
MTGQGQTDIF IADATDRIGG LHAILEEFDL SVLSGAGVAL KANFNSDDPF PASTHIDMLR 
GIADSILNEG PAHLTLAERS GMGATRTVLE NRGVFSLAQE LGFSVVVLDE IERNGWQEIQ
APGLHWQRGF FIANVFTWAD RVIQTCCLKT HRYGGHFTMS LKNSVGLVAK RVPGLDYDFM
GELHTSPHQR AMIAEINTFY STDLVLMDAT EGFATGGPDK GKLIRPNVII GGRDRVAIDA
TGVALLRSFG TSHDVSEGTI FSQEQIARAS ELGIGVTSAD QIRLVPLDAA SEPVAEKIQA
QLDSGV