| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1035 |
|---|
| Symbol | |
|---|
| ID | 5412250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 1017174 |
|---|
| End bp | 1018229 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640868261 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001404196 |
|---|
| Protein GI | 154150578 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.180031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.2486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAC ATGAGACCAA AAAATTTTGG CTCATCATCG ATGGAAAAAT TGTCACCGAT
CATAAGATCG AGGCATACAC CTTTGGAAAA ATTTTAACCA ATCTCCAGAA AGTCGTCGAC
GTTTTTCAAC AGACAAAATA CGGGGAACAT CCAAAAACGG ATTTCAAATT ATATCTTACG
AATACCGGCA AAGGAAGCGT AGCGGTTGCT TTTCAGCCGC TCGATTTTAC CACCGAACTC
TTCAGGGAAT CCCTTGTATT CGATGAGATG GTTTTTGATC TCCAGGACCT CATCAACGCA
CTCATCGAAA ACACTGATGA ATTCCGTGAG AAGATCGAAC GTGACTTTGA GGACCCGTCG
CAGATTATCC GGTTCCTTGA AAGTTTCCGG GGAATGCTCT CCAGGAAAAA CAAATTCAGC
GTGAAAGTCG GCTATGATAC GAAGAAGCCG AGAAATCCTG TAGTCTTACC TTCACACCGC
GAGGCTTACA TTGAAGGCCT TATCTCCGAA TATTACCGGA AGTCGGCGAT TGAGATCAAA
GGCGTCATCA CCCGCATCAA GGGCGACGAA CCGCGATCGT TTACCATCAA AACTCTCGAC
AATGAAACGA TTAAATGCGA TTATCCTGCT GACTGGGAGA AGGATGTCAG GGCGTTCTTC
AAATCGTCGG TGACGGTGAA TGGTGTCATG AGCAAAAGAG CCCGGTTAAA GGAGATGGAA
GTTGTCAAGG ATATCCAGTC CTTTAATTCG ATCACTTTGG ACACTCTTGA CGAGTTTACC
TTCCGCCAGC CGGTTAACAT CCGTGTATCC TACGATGATA AGGACAATCA CTGGTGCCTT
GCGAACGAAG AGTTGTCGCT GGAGGGATAT GGAAGCACGT ACGAGCAGGC GCTCTCCTCG
TTAAAGGAAA GCCTGGAGTC TCTCATTGTT GGATATCTTG CCTTCAAAGA TGCGAAGCTG
TCGGAAAAAT CCCGGAAGAT CAAACAAAAT CTTCAGACGT ATCTTGAGCC AAACGACTAC
CGCACGAAGT TTGGCGAGCT CAAGATAGAG GCCTGA
|
|---|
| Protein sequence | MAGHETKKFW LIIDGKIVTD HKIEAYTFGK ILTNLQKVVD VFQQTKYGEH PKTDFKLYLT
NTGKGSVAVA FQPLDFTTEL FRESLVFDEM VFDLQDLINA LIENTDEFRE KIERDFEDPS
QIIRFLESFR GMLSRKNKFS VKVGYDTKKP RNPVVLPSHR EAYIEGLISE YYRKSAIEIK
GVITRIKGDE PRSFTIKTLD NETIKCDYPA DWEKDVRAFF KSSVTVNGVM SKRARLKEME
VVKDIQSFNS ITLDTLDEFT FRQPVNIRVS YDDKDNHWCL ANEELSLEGY GSTYEQALSS
LKESLESLIV GYLAFKDAKL SEKSRKIKQN LQTYLEPNDY RTKFGELKIE A
|
|---|
| |