| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1025 |
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| Symbol | |
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| ID | 5411488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 1004752 |
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| End bp | 1005423 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640868251 |
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| Product | ABC transporter related |
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| Protein accession | YP_001404186 |
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| Protein GI | 154150568 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.490239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.768066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACCGG TCATCCAGTT TAAGGATGTC GTCAAGATTT ACCCACTCAA ATCGGGAGAT
GTGACTGCGA TAAACCATAT CTCCTTTTCC GTGGAACACG GGGAGTTCAT CTCGATCATG
GGGCCATCCG GTTCCGGCAA GTCAACACTT CTTACCATGA TGGGCTGCCT TGATACGCCC
ACATACGGGG ATATCTTTAT CTCCGGGATC GGGGTCCGCG ATATGAACGA CACCGAACTC
ACCAACCTGC GGAGGGACCG GATCGGATTT ATCTTCCAGT ACTTCAACCT CTTCCCCCTG
TTAAACGTTA TCGAGAACGT CAATTTTCCC CAGATGCTCA AGTCGCAGCG GCAGGTAGAT
GAGAACAAGG CAATTGAAAA ACTCCGCGCC GTCCAGCTCG ATGAACGGTT GTACACCCAC
ACCCCGCTCG AACTCTCCGG CGGCCAGCAG CAGCGGGTCG CAATAGCCCG GGCACTTATC
AATGATCCCG ATATCCTCCT GTGCGATGAA CCGACAGGTA ACCTCGATTC AAAGACCGGG
GCAAGCATCA TGGAACTCAT GAGCGAGCTG CACCGGAAAG GTGCTACGAT CATTGTAGTG
ACCCATGACC CCAATGTTGC AGAGTACACG GACCGGACGG TCCGGATCGT TGACGGGAGA
ATCGCATCAT GA
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| Protein sequence | MAPVIQFKDV VKIYPLKSGD VTAINHISFS VEHGEFISIM GPSGSGKSTL LTMMGCLDTP
TYGDIFISGI GVRDMNDTEL TNLRRDRIGF IFQYFNLFPL LNVIENVNFP QMLKSQRQVD
ENKAIEKLRA VQLDERLYTH TPLELSGGQQ QRVAIARALI NDPDILLCDE PTGNLDSKTG
ASIMELMSEL HRKGATIIVV THDPNVAEYT DRTVRIVDGR IAS
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