Gene Mboo_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1018 
Symbol 
ID5411481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp999338 
End bp999838 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content55% 
IMG OID640868244 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001404179 
Protein GI154150561 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.42575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCC TGTTACAGTT TGCAGCAAAA AAAAGCGAGC GGGCAAGGAG CCTGCTTGCC 
CTCTATGTGA TCCATTCGCT CTCAAAGGGA GAAAAATCCG GCTATGATAT CCTCAAGGAA
CTCGGGGAGC TCACGGAGGG AAACTGGGTC CCAAGCAAGG GCACGCTCTA TCCCCTGCTC
CACCAGCTTG AAGAGGAGGG ACAGATTGTT TCGGTCCCAA AGACCACCGG CGCCCGGGCC
CGGGCAGTCT TTTGTCTTAC CCCCCTCGGG AAGGAGACGC TCAAACGGAT CCGGGCCCAC
AGCGGGGAGC ACCACAAAAA AATGGCACAC TACCGCCAGG TGATTACCGC GATATTTGGC
GATACCATCC ACCCTGAGCT GAACCTGCTC TTCGAGATAA AGACGCTCCT TGATGAGGTG
CAGAAAGAAA ATGAGCCGGA GGCAATGAAG ATCCTCCGGC GCTGCCGCGA CGAACTTAAA
AAGAGTGTGA ACCGGACATG A
 
Protein sequence
MTSLLQFAAK KSERARSLLA LYVIHSLSKG EKSGYDILKE LGELTEGNWV PSKGTLYPLL 
HQLEEEGQIV SVPKTTGARA RAVFCLTPLG KETLKRIRAH SGEHHKKMAH YRQVITAIFG
DTIHPELNLL FEIKTLLDEV QKENEPEAMK ILRRCRDELK KSVNRT