| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1015 |
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| Symbol | |
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| ID | 5411751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 995224 |
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| End bp | 996720 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640868241 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001404176 |
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| Protein GI | 154150558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.817522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGTTCT CGTTACCCTC CCTCCGCCCG CTTACGGATC CCGGCAACAT CCCAGCCCAG
CACCTTATTG TAGCCACGGC TTCGCTTGCC TCGCTGATGG GCGCGCTCGA CATGAGCGTG
GTCAACATCA CCGTCCCTTC AATTATTAAG GCGTGGCAGA TCCCGGTGGG CGTTGGCACA
CTCATCATCA TCTCGTATAT GCTCACGATC ACCGGCCTGA TCCTCTTTAT GGGAAAACTG
GGCGACCGGT ACGGGTTCCG GCACATGTTC CTGCTGGGCC TTGTGCTCTT TGGCCTTGGA
TCCTTCCTGT GCGGGATCGC GCCGGACATA ACAAGCCTGA TCGTGTTCAG GATCCTCCAG
GGGGCCGGGG CAGCGATGTT CTCTGCGATC GGGCCGGCGA TCATTACCAC GTACCTGCCG
GTCTCGGTCC GCGGTAAATC GCTGGGGCTT TTAATCGCCA TGTCTGCGGC CGGCTATGCT
CTTGGCCCGG GTATCGGAGG CTTTGTCTCG CAGTACGCCG GCTGGCGGTG GATCTTCTTC
CTCAACCTCC CCATCGTCCT TGCCACCCTT GTATTGAGCT GGTACTGCCT CCCGTCCGCG
TCCGGGACCA CCGAACAAAA ACCCCTCAAT TTCACCGGCC CGTCGCTTTT TGTCGCGGCC
CTGGTGCTCA TGCTTGCGGC ATTTACGTTC TTCCAGGTAC CGGGCACACC GGACGCGGTG
CTCCTGCTCC TCTTTATTGT CGGCGCGATC ATCGGCGGGA TCTTTATTAT GCGCGAGCGG
CATAACCCCG ATCCCCTCAT CAACCCGGCG CTTGTACACA ACCGCGATTT CTGCCTGGGC
ATCCTTGCCT GCCTGATCGT CACCACCCTC TTTTCCGGGG TCACGTACCT CATGCCGCTG
TACCTGATCA ACTCCCGGCA CCTTGACCCG TCGCTTGCCG GCCTGATCAT GACTGCCCCG
GCGCTCCTTT CGATCCTTGT TGCCCCGGCA GCCGGGAGCC TTGCCGACCG GCACGGAAGC
ATTCTTATCT CCATGGCCGC AGTCGGGCTT GCCGCCGGTG GATTTCTCAT CTTCTTTACC
TTTAACCCCC TCACCTTTGT GATTGTAATC GTGGCCGGCA TGCTCATCAC CCGGGTCTCC
ACCGCCGCGT TCTTTGGCCC CAATGCCCGG CTGGTCATGG GCCACTGCCC TCCCGATTCG
GTGGGAGACG GGTCAGGCGT GCTCATGACC GTCCGGCACG TGGGCATGGT TGCCGGGATC
GCCTTTTTCC AGAGCGTCTT TGCCATCCGC ATGTACATGG CCGGCATCCC CCGGGACGGT
ACGCCGCTTG TCGCAAAGCT GACCCCGGCC CTCTCCGTGC TCGGGTACCA GGCCGTGTAC
CTGGTCGCGT TTGTCCTCTG CATTGCCGTG GTTGTCATTA TCCGCGTGAC CCGTGATGTG
CCGGACAAGG AGTACGCCGC GGAGTCCGGG GTAATTCCCC CGGATGGCAT GATGTAG
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| Protein sequence | MKFSLPSLRP LTDPGNIPAQ HLIVATASLA SLMGALDMSV VNITVPSIIK AWQIPVGVGT
LIIISYMLTI TGLILFMGKL GDRYGFRHMF LLGLVLFGLG SFLCGIAPDI TSLIVFRILQ
GAGAAMFSAI GPAIITTYLP VSVRGKSLGL LIAMSAAGYA LGPGIGGFVS QYAGWRWIFF
LNLPIVLATL VLSWYCLPSA SGTTEQKPLN FTGPSLFVAA LVLMLAAFTF FQVPGTPDAV
LLLLFIVGAI IGGIFIMRER HNPDPLINPA LVHNRDFCLG ILACLIVTTL FSGVTYLMPL
YLINSRHLDP SLAGLIMTAP ALLSILVAPA AGSLADRHGS ILISMAAVGL AAGGFLIFFT
FNPLTFVIVI VAGMLITRVS TAAFFGPNAR LVMGHCPPDS VGDGSGVLMT VRHVGMVAGI
AFFQSVFAIR MYMAGIPRDG TPLVAKLTPA LSVLGYQAVY LVAFVLCIAV VVIIRVTRDV
PDKEYAAESG VIPPDGMM
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