| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1011 |
|---|
| Symbol | |
|---|
| ID | 5411747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 991455 |
|---|
| End bp | 992108 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640868237 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001404172 |
|---|
| Protein GI | 154150554 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.294908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACCTGG TACTTGCGGC AGCCTACCTC CTCCCGTTTA TTTTTCTCGC CGCATTTATC
GGGAGGATCG ACACGCGCTT TGTCCTCTTT GTGCTCTGGG GCTGTGTTGC TGCAATCCCG
GCCCTTCTTC TTGAACCGGT CCTTGCTTCC GCATTCCAGT CCGATATCCC CACTGCGATC
GCCTCCATTA CCATCTCGCC GCTTGTAGAG GAATTTTTTA AAGCCCTGCC CCTGCTCATC
CTGGCACTTG CCGGGATATA CCAGAAAGAC CGGGAGATCT TTTTTTGCGC CATGGCCTCG
GGAGTCGGGT TTGCCGTAGT AGAGACGGGC CTGCTTGCCT CAACAGACCT CTTTGAGATC
CTTATCCACT CGTTCTCTAC TACCCTCATG CACGGCTGCA CGTGCGGGAT TATCGGGTAC
GGGATTGTGA TTGCCGATCA TTTCGACCGG CGGGCGTTTG CCGCTCTCGT GTTTGGATTT
TTCACACTCG CAGTCACCGT GCACGCGATC TACAATACTC TTGGGACCAC ATTTTTTGGC
GTACCTGGGA TCTGCACAGA CCTCATCTTC CCGGTCCTCC TGTTCTTTAT GCTCCTTGCC
TGCTACCACA TCGATCTCGT GGCGCTCCTT ACCCACCGGG CGGCAGAGAA CTAA
|
|---|
| Protein sequence | MDLVLAAAYL LPFIFLAAFI GRIDTRFVLF VLWGCVAAIP ALLLEPVLAS AFQSDIPTAI
ASITISPLVE EFFKALPLLI LALAGIYQKD REIFFCAMAS GVGFAVVETG LLASTDLFEI
LIHSFSTTLM HGCTCGIIGY GIVIADHFDR RAFAALVFGF FTLAVTVHAI YNTLGTTFFG
VPGICTDLIF PVLLFFMLLA CYHIDLVALL THRAAEN
|
|---|
| |