| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1009 |
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| Symbol | |
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| ID | 5411745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 989003 |
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| End bp | 990523 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640868235 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001404170 |
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| Protein GI | 154150552 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00909] amino acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.146582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA ATTCATTCTT CAGTCATGCC ATATTCAAAA AAAAGCCCAT AGAACGATCC
GCACCGGATC CCGAAGGGAA CAAATCCCTG TCAAGGACCC TGAGCACGTT TGACCTTGTC
ATGCTTGGGA TCGGGGGCAT CATCGGCATG GGAATCTTCG TCCTTTCGGG CCTTGTTGCC
GGGCTCCATG CGGGAAACGC TCTCCCGCTC TCGCTTGTCA TTGCCGGTAT CTCCTGCCTT
TTTGCTGCTC TCTGTTATGC GGAATTTTCC GCCATGATCC CGCTTGCCGG GAGCGCTTAT
ACTTACTGCT ACATGACCCT TGGCGAGATC TGGGCATGGA TCATCGGCTG GGATCTCATT
CTTGAGTACG GTCTTGCGGT CTCTGCGGTA GCGATTGGCT GGTCCGGGTA CTTTGCTGCC
CTCCTTAAGG CTGTCGGGAT TGTGCTGCCC CCGGCTCTTA CCAGCCCGCC GGGCGCGGGC
GGGGGGCTGA TCAACCTCCC TGCCGTACTT ATTGTCCTTT TCCTCACCCT GCTTCTGGTA
CGGGGGGCCA AAAAAAGTGC ACGGACAAAC GCGATCATTG TTGCCATCAA ACTTGCCGTT
ATCGCATTTT TTATTGTGCT GGGCTTGTTT TCCCTTAACC CGGCGAACTG GACACCCTTT
ATGCCGCCGA ACGGATGGCT CGGGGTATTC TCGGGTGCTG CCCTGTTCTT TTTTGCCTTT
ATCGGGTTTG ACGCAGTGGT CACGGCAGCC GAAGAGACAA AAAACCCGCA GAAGAGCCTG
CCGCTCGGGC TGATAGGCTC CCTTCTCATC TGCATTGTCA TCTATATCGT AATTGGCGTG
ATCCTGACCG GCATTGTACC GTTTGCAGAA CTTGCCGGGC CCGATGCAAT CAATGCGCCG
ATCGCTTACG CACTGGGCCG GATCGGGTTC TCATGGGGGG CGTTTATTGT TTCGGTCGGC
GCGCTCTGCG GCATGACCTC TGTTATCCTT GTCATGCTGT TCGGGCAGAG CCGGATCTTC
TTTGCCATGT CCCGGGACGG TCTCCTGCCG GCGTTCTTTT CCGATCTCCA CGAGAAGACA
AAGGCGCCGG TAAAAGTGAT CCTTGTTATT GGGATCGTCA CTTCCTGCGT TGCCGGTTTC
TTCCCCATTG AGATCGTAGC GGAGCTTGTG AACATGGGCA CGCTTGTGGC ATTTGCGATC
GTTGCCATCG GTATCCTCCT GCTCCGGGTA GAGCAGCCCG GTCTTTCCCG CCCGTTCCGC
TGCCCCGCCG TACCCCTTGT ACCCCTCTTC TGTGTGGGCA CCTGTGTATT TCTGATCTTC
AACCTCAGCT CCCATGCCCA TCTCATGTTT GTGGCCTGGC TTGTGCTTGG TCTTGCGATC
TACTTCCTCT ATGGCATGCG CAAAAGTGTT GCCACATCTG TAAAAAAGAC CTGTACGCTC
TCCGACCCGG CCCCCGCCGG CACGGAATTT CTGGTGTCCG ATACAGCACC GGCAGGCCCC
GGGCAGCAGC AGGGACCGTA A
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| Protein sequence | MDKNSFFSHA IFKKKPIERS APDPEGNKSL SRTLSTFDLV MLGIGGIIGM GIFVLSGLVA
GLHAGNALPL SLVIAGISCL FAALCYAEFS AMIPLAGSAY TYCYMTLGEI WAWIIGWDLI
LEYGLAVSAV AIGWSGYFAA LLKAVGIVLP PALTSPPGAG GGLINLPAVL IVLFLTLLLV
RGAKKSARTN AIIVAIKLAV IAFFIVLGLF SLNPANWTPF MPPNGWLGVF SGAALFFFAF
IGFDAVVTAA EETKNPQKSL PLGLIGSLLI CIVIYIVIGV ILTGIVPFAE LAGPDAINAP
IAYALGRIGF SWGAFIVSVG ALCGMTSVIL VMLFGQSRIF FAMSRDGLLP AFFSDLHEKT
KAPVKVILVI GIVTSCVAGF FPIEIVAELV NMGTLVAFAI VAIGILLLRV EQPGLSRPFR
CPAVPLVPLF CVGTCVFLIF NLSSHAHLMF VAWLVLGLAI YFLYGMRKSV ATSVKKTCTL
SDPAPAGTEF LVSDTAPAGP GQQQGP
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