Gene Mboo_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_1003 
Symbol 
ID5411680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp982531 
End bp983460 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content58% 
IMG OID640868229 
ProductDNA adenine methylase 
Protein accessionYP_001404164 
Protein GI154150546 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0410349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAC ACGGAAAAAA CGGAGGGGTG CGACCCTTCC TGAAATGGGC CGGGGGCAAG 
TCGCAGTTAC TTGGCGATAT TGCCCGGTGC CTGCCGCCCG GTGCAGGAAA TGGCGGGAAA
ATCACGCGCT ATATCGAGCC TTTTGTCGGG GGCGGGGCGG TTTTTTTCTC CCTTGTCCCG
CGCTGCTCTT TTAACGAGTC CGTGATCTGC GATATTAACG AGGAACTTGT TCTCACCTAC
CGCGTAATCC GGACCTCCCT GCCCCGGCTT GCCGGCGAAC TTGCAGGAAT CGCGTCTGCG
TACCGCGCCC TTTCCGGACC GGGGCAGGAA GCGTATTATT ACGAGATCAG GGACGCGTTC
AACCGCGAGC GGAAATCGAT TGATTTTACA CGCTACAATG AACGGTGGAT CCGGCGGGCG
GCCCAGATCA TCTTCCTCAA CCATACCTGT TACAACGGCC TGTTCCGGGT AAACCAGAGC
GGCGGGTTCA ATGTCCCGTT TGGACGGTAC CGGAACCCGG AGATCTCCGG TTACAAAAAC
CTGGAAGGTG CAGCAGCACT CCTTTCCCGG ACACGGATCC TCTGCGGGGA TTTTACCCGG
TGCAGGAGCA TGGCAGATGA CCAGACATTC GTGTACCTCG ACCCGCCCTA CCGTCCGCTG
AATGCCACCT CCTCGTTTAC CTCATACTCC CGGGGCGGCT TTTCCGAGAA CGACCAGGAG
CGCCTGGCAG CTTTTTTCCG GGACCTGGAC CGGAAGGGTG CACAGGTCAT GCTGAGCAAC
TCCGATCCGG CCAGTGAAAA CCCCGACGAT GCCTTCTTTG ACGAACTCTA CAACGGATTT
ACCATACGGC GCGTTCCGGC CCGGCGGTTG ATCAACTGCA ACGGCGCCCG GCGTGGTACG
GTAAGCGAAC TCCTGATCAC CAACTATTAA
 
Protein sequence
MARHGKNGGV RPFLKWAGGK SQLLGDIARC LPPGAGNGGK ITRYIEPFVG GGAVFFSLVP 
RCSFNESVIC DINEELVLTY RVIRTSLPRL AGELAGIASA YRALSGPGQE AYYYEIRDAF
NRERKSIDFT RYNERWIRRA AQIIFLNHTC YNGLFRVNQS GGFNVPFGRY RNPEISGYKN
LEGAAALLSR TRILCGDFTR CRSMADDQTF VYLDPPYRPL NATSSFTSYS RGGFSENDQE
RLAAFFRDLD RKGAQVMLSN SDPASENPDD AFFDELYNGF TIRRVPARRL INCNGARRGT
VSELLITNY