| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_1000 |
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| Symbol | |
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| ID | 5411677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | - |
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| Start bp | 979638 |
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| End bp | 981098 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640868226 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001404161 |
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| Protein GI | 154150543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.326539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.768066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACTCA TCGATTCAAT CCTGAAAAGC AGCGGAGTAA ATGCAGAGAC CGAGTTTTGC
AAGGCCGAGA CCCTCTGCCG GCAGGGATAC TACACCGATG CGGTAAATAT CCTCGATAAA
GTACTTGCCG CGGAGCCCAA TCATCTCAGG GCCTCGCAGC TCAAGGGCTT TGCCCTTTAC
CAGATGGGAA CTTTTGAAGA AGCACTCCAG TATTTCGACA AGGCGCTGGG CATTGATGCA
AACCTTCCCG ATGCGCTGGT ATACAAGGGA CTCATCTACT CCGGTTTTGG GAAACATGCC
CACGCACTTG ATCTCTATGA CCGGGCACTT GCGATCCATC CCGGCTTTAT CCAGGCCTGG
TATGCAAAAG GACTCACCCT TGCCATCCTT GAACGGTACG ACGAGGCGAT CCAGTCGTAC
GACCGGGTGC TCGTCCTCCA GCCAAAGCAC GTGGATGCCC TGATCGGGAT AAGCGTTGCC
CGTAAGAAAA AAGGAGCCGG GCCAAAAGAG AACACAATCC TCCAGCATCC CAAAACCAAC
CTCCCGGAAA AATCCCGTCC TGCCCCTGCT GCCCCGATCG CAGCATCACC CGCACAAACC
CAGAAACCCC TTGCTCCAAA ACCTGCGCCG GTACTGGTTC AAAAGCCTCC TGAACCGGTC
GCGATCCCGG CACACCCCAA ACTATCTTCC CGGCAGGATC CTGCACCGGC GCTGGTACCG
GCGGAATCAC GAATAGTTCC AAACTCCTCA CCGGCCGCGG TGCTGAATGT GCGACAGCCC
GCTGCGGTAC CAGCCCATAA TGCATCCCGG GCCATGCCAA AAATGCCGCC GGTACCTGCC
ACGGTTCCGG CACAGCCACG CACCGCACCG GAAGCACCGG CCACACACCG TGGATTCCCG
GAAGAAAACC TTCTTGAACC GGAACCATCA TCACCGGCAT CTCCCCGATG CAGCACCTAC
GAGGAGATGA TCCGGGAGAT CGCTGCAAAC CCGGAGAAGG TACCGGGCCC GGACCGCTGG
CTTCTTCTGG GTAACCTCTC CATGAAACTC GGGAAGTTCC GGGACGCAGC CGGTATGTTT
GAGCATTACC TTGGACTTGT CCAGAATGAT GCCGATGCAT GGCGGGCATT AGGGGATGCA
CATAAAAAAT GCGGCCTCTA TGACGAGGCC CGTGAGGCCT ATGACCACGC ACTTGCACTG
AACCCGGAGA CAGCGGCCGT CTGGATCAGC CACGCAAAAG TGCTGGTGAT GCTGCGGGAT
CATGAGGGTG CTCTTGTCTC CTGCGATCAG GCCATCTCGC AGGACGGGGA ATATATCGAA
GCATGGCTGT ATAAGGGTTT CATCCTCAAA AAAATACACC GGAACGACGA TGCAATGGCT
GCGTACGATC GCGTACTCAT GCTTAACCCG GGCCATGATC ACGCAGTCCG GGAACTGCGG
CGCATGAAGG GCGGGGCGTA A
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| Protein sequence | MGLIDSILKS SGVNAETEFC KAETLCRQGY YTDAVNILDK VLAAEPNHLR ASQLKGFALY
QMGTFEEALQ YFDKALGIDA NLPDALVYKG LIYSGFGKHA HALDLYDRAL AIHPGFIQAW
YAKGLTLAIL ERYDEAIQSY DRVLVLQPKH VDALIGISVA RKKKGAGPKE NTILQHPKTN
LPEKSRPAPA APIAASPAQT QKPLAPKPAP VLVQKPPEPV AIPAHPKLSS RQDPAPALVP
AESRIVPNSS PAAVLNVRQP AAVPAHNASR AMPKMPPVPA TVPAQPRTAP EAPATHRGFP
EENLLEPEPS SPASPRCSTY EEMIREIAAN PEKVPGPDRW LLLGNLSMKL GKFRDAAGMF
EHYLGLVQND ADAWRALGDA HKKCGLYDEA REAYDHALAL NPETAAVWIS HAKVLVMLRD
HEGALVSCDQ AISQDGEYIE AWLYKGFILK KIHRNDDAMA AYDRVLMLNP GHDHAVRELR
RMKGGA
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