Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0976 |
Symbol | |
ID | 5409825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 960333 |
End bp | 961124 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640868202 |
Product | regulatory protein, ArsR |
Protein accession | YP_001404137 |
Protein GI | 154150519 |
COG category | [K] Transcription |
COG ID | [COG1497] Predicted transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.262232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.036754 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGGAGCA AGGGCGATGT CTCGCGCTTC CAGATCCTTG TAGAGATTGC CGAACGCCAG CCGGCGGTTC GCCAGCAGGA GATTGCCGAA AAGATTGGCA TGACCCCTCA GGCCGTCTCC GAATACATCC GCGACCTGGT TGACGACGGC ATGGTGGCCG TGAGCGGCAG GAGCAATTAT GCGGTGACCA AGACCGGGAT GGCATGGGTC ATGGAGAATG CCGCTACCCT GGAATTATAT CTCCGGCATA TCCGGCGCGA CATCATCAAG CATGTCTCGG TCTGGACGGC AATTGCTGCC GATGACCTGA AAAAAGGAGA GATCGCCGGT CTTTACATGA AAGACGGGTA TCTCTATGCG GGGAAGAACC CGACGTCGGC GACAGCAACG GTCTATGCGG ACGCAAGGAA GAACAATGAC GTGGGAATTT TCGATGTAAA CGGGATTATC GAACACCACG AAGAGATCAT CCATGTCTGT ATAGTGCCCC GGATCCAGCG CGGGGGTTCT CTCAACGTCA GGATTGACAA ACTCAAAAAG ATCGTTGCAA CGGTCGGATT AGTCGCGGCT GTGGGGGTAG AGTCGTCGAT CGCGCTGAAA TCCATTGGCA GAAACCCGGA TCTCTTCTTT GGGGCATCAG AAGGCGTCAT CGATGCCGCA TACCACGGAA TTAGGTGTGC GATCGTTATT GTAGACGACG AGTCAGCAAA TTTTGTCAAG CGCCTGGAGA ACACCCCGCT CGAGTATAAG ATTCATGATT TGATCCTCCC CGATGATCAA AAATCATTGT AG
|
Protein sequence | MRSKGDVSRF QILVEIAERQ PAVRQQEIAE KIGMTPQAVS EYIRDLVDDG MVAVSGRSNY AVTKTGMAWV MENAATLELY LRHIRRDIIK HVSVWTAIAA DDLKKGEIAG LYMKDGYLYA GKNPTSATAT VYADARKNND VGIFDVNGII EHHEEIIHVC IVPRIQRGGS LNVRIDKLKK IVATVGLVAA VGVESSIALK SIGRNPDLFF GASEGVIDAA YHGIRCAIVI VDDESANFVK RLENTPLEYK IHDLILPDDQ KSL
|
| |