Gene Mboo_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0976 
Symbol 
ID5409825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp960333 
End bp961124 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content54% 
IMG OID640868202 
Productregulatory protein, ArsR 
Protein accessionYP_001404137 
Protein GI154150519 
COG category[K] Transcription 
COG ID[COG1497] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.262232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.036754 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGCA AGGGCGATGT CTCGCGCTTC CAGATCCTTG TAGAGATTGC CGAACGCCAG 
CCGGCGGTTC GCCAGCAGGA GATTGCCGAA AAGATTGGCA TGACCCCTCA GGCCGTCTCC
GAATACATCC GCGACCTGGT TGACGACGGC ATGGTGGCCG TGAGCGGCAG GAGCAATTAT
GCGGTGACCA AGACCGGGAT GGCATGGGTC ATGGAGAATG CCGCTACCCT GGAATTATAT
CTCCGGCATA TCCGGCGCGA CATCATCAAG CATGTCTCGG TCTGGACGGC AATTGCTGCC
GATGACCTGA AAAAAGGAGA GATCGCCGGT CTTTACATGA AAGACGGGTA TCTCTATGCG
GGGAAGAACC CGACGTCGGC GACAGCAACG GTCTATGCGG ACGCAAGGAA GAACAATGAC
GTGGGAATTT TCGATGTAAA CGGGATTATC GAACACCACG AAGAGATCAT CCATGTCTGT
ATAGTGCCCC GGATCCAGCG CGGGGGTTCT CTCAACGTCA GGATTGACAA ACTCAAAAAG
ATCGTTGCAA CGGTCGGATT AGTCGCGGCT GTGGGGGTAG AGTCGTCGAT CGCGCTGAAA
TCCATTGGCA GAAACCCGGA TCTCTTCTTT GGGGCATCAG AAGGCGTCAT CGATGCCGCA
TACCACGGAA TTAGGTGTGC GATCGTTATT GTAGACGACG AGTCAGCAAA TTTTGTCAAG
CGCCTGGAGA ACACCCCGCT CGAGTATAAG ATTCATGATT TGATCCTCCC CGATGATCAA
AAATCATTGT AG
 
Protein sequence
MRSKGDVSRF QILVEIAERQ PAVRQQEIAE KIGMTPQAVS EYIRDLVDDG MVAVSGRSNY 
AVTKTGMAWV MENAATLELY LRHIRRDIIK HVSVWTAIAA DDLKKGEIAG LYMKDGYLYA
GKNPTSATAT VYADARKNND VGIFDVNGII EHHEEIIHVC IVPRIQRGGS LNVRIDKLKK
IVATVGLVAA VGVESSIALK SIGRNPDLFF GASEGVIDAA YHGIRCAIVI VDDESANFVK
RLENTPLEYK IHDLILPDDQ KSL