Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0949 |
Symbol | |
ID | 5411805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 935711 |
End bp | 936142 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640868175 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001404110 |
Protein GI | 154150492 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.379941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAT CAAAAGAGAT GCCCGTACCG GCAATCTTCC CGAAAGGGGA GAAGATCTCC GGGGGAGGCA TCGTAAATGA CCATTTCACC GGGACGGCAT GGCTTTCCAT GCTTGTTCCC GATGACGGGA CCTATCACTG TCCCATCTAC AATGTGACGT TTGAGCCGGG TGCACGGAAC AACTGGCACA AACATCCCGG CGGACAGATC CTGCTGGTCA CTGGAGGCAG GGGGTACTAC CAGGAAGAGG GAAAACCTGC ACGAGAACTG CATGCCGGGG ATGTGGTAAC CATCCCCCCT CAGGTAAAAC ACTGGCATGG CGCTGCGCCG GACAGCGGCT TTGTCCATAT CGGGATCACG GCAAACCCCG GGCTCGGAGA TGCCCGGTGG CTGGAGCCCG TAACTGATGA GGAATATCAG AAACTTGACT GA
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Protein sequence | MDSSKEMPVP AIFPKGEKIS GGGIVNDHFT GTAWLSMLVP DDGTYHCPIY NVTFEPGARN NWHKHPGGQI LLVTGGRGYY QEEGKPAREL HAGDVVTIPP QVKHWHGAAP DSGFVHIGIT ANPGLGDARW LEPVTDEEYQ KLD
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