Gene Mboo_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0949 
Symbol 
ID5411805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp935711 
End bp936142 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content57% 
IMG OID640868175 
Productcupin 2 domain-containing protein 
Protein accessionYP_001404110 
Protein GI154150492 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.379941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCAT CAAAAGAGAT GCCCGTACCG GCAATCTTCC CGAAAGGGGA GAAGATCTCC 
GGGGGAGGCA TCGTAAATGA CCATTTCACC GGGACGGCAT GGCTTTCCAT GCTTGTTCCC
GATGACGGGA CCTATCACTG TCCCATCTAC AATGTGACGT TTGAGCCGGG TGCACGGAAC
AACTGGCACA AACATCCCGG CGGACAGATC CTGCTGGTCA CTGGAGGCAG GGGGTACTAC
CAGGAAGAGG GAAAACCTGC ACGAGAACTG CATGCCGGGG ATGTGGTAAC CATCCCCCCT
CAGGTAAAAC ACTGGCATGG CGCTGCGCCG GACAGCGGCT TTGTCCATAT CGGGATCACG
GCAAACCCCG GGCTCGGAGA TGCCCGGTGG CTGGAGCCCG TAACTGATGA GGAATATCAG
AAACTTGACT GA
 
Protein sequence
MDSSKEMPVP AIFPKGEKIS GGGIVNDHFT GTAWLSMLVP DDGTYHCPIY NVTFEPGARN 
NWHKHPGGQI LLVTGGRGYY QEEGKPAREL HAGDVVTIPP QVKHWHGAAP DSGFVHIGIT
ANPGLGDARW LEPVTDEEYQ KLD