| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0947 |
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| Symbol | |
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| ID | 5411803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 933522 |
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| End bp | 934973 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640868173 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001404108 |
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| Protein GI | 154150490 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.289424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.783186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTG CAGCAAGGGC CGGGAACCGT TCTCGCCCCA ATGCCGTGCT CGTGCTCATC
CTTGCCGGCT ACCTGATGAT CGTCCTCGAC ATCGCGATCG CCATCACTGC GCTGCCGCAG
ATCCATACTT CTCTTGGCTT CTCGGACACC GGGCTCTCCT GGGTACAGAA TGCCTATATG
CTCACGTTCG GGGGGCTGCT CCTGCTCGGG GCACGGTCCG GCGATATTCT CGGCCGGCGC
CGCATGTTTG TTCTGGGGAT TGGTATCTTT ACGGCAGCCT CGCTTGCGGT TGGTCTGGCA
CCATCTGCTG TAGTTCTTGT TGGGGCCCGT GCTCTTCAGG GAGTGGGTGC AGCTATCCTT
GCCCCGTCAA CCCTCGCGCT TCTCATGGCA AACTTTCCCG AGGGACGCGA ACGCACGCGT
GCAGTGGCAT ACTATGGCGC CGTTGCCGGG GTCGGGGCAA GTCTTGGTCT TGTGCTCGGC
GGTATCCTCA CTACGTGGAT CTCCTGGCGT GTTGCGTTCT TCGTGAACGT GCCCATCGGG
ATCGCCATGA TGCTTGCTGC ACCGTATTAC CTCACCGAAA CGGAGCAGCG CCCGGGCCGG
TTCGATCTTG CCGGCGCCAT CACCTCGACC CTGGGGATGA CGGCGCTCGT GTACGGCATT
GTCAATTCCG CGACCGCCGG CTGGGGCGAT CCCACAACAA TCATGGCCCT TGCTGCAAGC
GTCCTCCTGC TCGCGTTCTT TATCTTTAAT GAATGGCGGG CAGATCAGCC GATCATGCCG
CTGCGCCTGT TTGCAAGCCG CGAGCGCACG GGGGCGTACG CAGCCCGTAT CCTCTTTCTT
GGGGCAATGC TTGGCTTCTG GTTTTTTATC ACCCAGTTCC TCCAGGTCGT GGACGGCTTT
TCCCCAATTG AGGCCGGCCT TGCCTTTTTC CCGATGACCG TTGCAAACTT TGTCGTGGCG
GTCTATGTCC CGCAGATGAC ACGGCGGTTT GGCAACGGGC GCCTGCTTGC CGGGGGTCTT
GCCATCACTC TTGTGGGAAT GTTCTGGCTG AGCCGGCTCT CTGCCGACAG CGCCTACGGT
ACCGGCATAG CGCTGCCAAT GATCCTGATC GGCATCGGCC AGGGTGCATC CCTTGCCCCG
CTCACGGCAT CCGGTATTGC CGGGGTCACA AAAGAAGATG CAGGCGCGGC ATCAGGGCTC
GTCAACGTTG CCCACCAGCT GGGCGGTTCG CTCGGGCTTG GTATCCTTGT GACGGTGTTT
GCCGCTGCCG GTTCCGCTGC GCTTGCCGGA CCCCAGCTCC TCGCGGTCCG CGTGGCGGCA
TCGCTGTCGG GCGGGACGAT GATGCTCGGG ATCGCCTTTG TCATCGTCAT GCTCTTGATC
GTATGGCCCG GTACCGTACC CGGGAATCAG AACGTACCGG AGAAAATGAA CTATCCGGAG
GTACAAAAAT GA
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| Protein sequence | MPAAARAGNR SRPNAVLVLI LAGYLMIVLD IAIAITALPQ IHTSLGFSDT GLSWVQNAYM
LTFGGLLLLG ARSGDILGRR RMFVLGIGIF TAASLAVGLA PSAVVLVGAR ALQGVGAAIL
APSTLALLMA NFPEGRERTR AVAYYGAVAG VGASLGLVLG GILTTWISWR VAFFVNVPIG
IAMMLAAPYY LTETEQRPGR FDLAGAITST LGMTALVYGI VNSATAGWGD PTTIMALAAS
VLLLAFFIFN EWRADQPIMP LRLFASRERT GAYAARILFL GAMLGFWFFI TQFLQVVDGF
SPIEAGLAFF PMTVANFVVA VYVPQMTRRF GNGRLLAGGL AITLVGMFWL SRLSADSAYG
TGIALPMILI GIGQGASLAP LTASGIAGVT KEDAGAASGL VNVAHQLGGS LGLGILVTVF
AAAGSAALAG PQLLAVRVAA SLSGGTMMLG IAFVIVMLLI VWPGTVPGNQ NVPEKMNYPE
VQK
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