Gene Mboo_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0946 
Symbol 
ID5411802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp932989 
End bp933342 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content53% 
IMG OID640868172 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001404107 
Protein GI154150489 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.26449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.613112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC CACCGAAAAA ATACAAATAC AGCTGGCCGA TCGAGGCTAC CCTTGACGTG 
ATCGGGGGCA AGTGGAAGCC GCTGGTCATC TACACGCTTA AGGAGGGGAC GCTCCGGTTC
AGCCAGATCG TGGACAAGGT CGAGCCCCGG ATCACCCAGA GGATGCTCAC CAAAGAACTC
CGTGAACTGG AAAAAGACGG GCTCGTTAAA AGAAAAGTGT ACGCACAGGT CCCGCCAAAG
GTTGAATATT CGCTTACAAA AAAGGGAGAA TCCCTGATCC CGATCCTCGA TGAGCTCTGC
GACTGGGGCT CCGAGCATAT GGGGGATGAC ATCGAGTTCA CATGCGAAGA ATAG
 
Protein sequence
MKIPPKKYKY SWPIEATLDV IGGKWKPLVI YTLKEGTLRF SQIVDKVEPR ITQRMLTKEL 
RELEKDGLVK RKVYAQVPPK VEYSLTKKGE SLIPILDELC DWGSEHMGDD IEFTCEE