| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0937 |
|---|
| Symbol | |
|---|
| ID | 5410054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 923170 |
|---|
| End bp | 924792 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640868163 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001404098 |
|---|
| Protein GI | 154150480 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0147133 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.254287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTT TGAACGATAT TGAGAATACC GATAAGACAA AATTCCGGCT GATAGGAAAG
AGCGTCCTGT CGTACCGCTT TATTGTGCCC CACGATGCAG AGCTCTTCGT TGGGGATATC
GTAAAAATTT CCGATGAGAA AAAGGAATAC ACTTTCTTTG CAAAGGTCAT CGATCTCTTC
CATGAGAGCA ATTTTGCCGA TAAAAACTGG GATACCCGCC CGTTCTCCGA ACTGTTCTAC
GGCCTGGGGG AGGATGTGTT CATCGGGGTG GAAGCAGTCC CGCTCGGGTT TACCGACAGG
ACCGGCACGT TCCGGAAACC CCGGACCATC CCGGTGAAAT TTTCCGACGT CACTCTGCCC
GAGGCCGGCG ATTTTGCCTT CCTTTCAAAA GTAATGGGCG ATATCGAGGT CGGGGTCATG
CGGACCGGCC AGGGCGTGTT AAAGGAAGTC CCGGTCAAGA TCCATAGCAA AGTTCTTCCC
CAGCACATGG GCGTCTTTGC CACCACCGGC ATGGGCAAGT CCAATTTCAT GAAAACCTTC
TGCGCCTCGT GCATGAAAAT GCAGCAGTTC GGTCTCCTCG TGGTCGATCC CCATGGCGAA
TACGTGCGGG GCGGCCTTTC GAGCACCGGG AAAAAAACGC TCGGCCTCCT CCATTACACC
AATGGCAGGG ACGGCCTGGT GGTCTTTACT ATCAGCGAGG GCGACCGGAA AAAATACTCG
CTCTCCAGCC TCTGGCTGGA CTACGACGAT TTCCGGCTCT CGGACTTAAA CCTGCTGTAC
GATTCCTCGC AGGCCCAGCG CGACGTGATC GAGACCCTTG ACGAGATTTC GGGAAGCGAA
CTTGTCCCCT TCTTCCTTAC CGCAAACGTG GACACCCTGC CGGATGAGGT AAAGGAAAAC
CGGTACACCG GGCCGCACCC GGAGATTGCA GAGAAACTGG GCTCATTCCA CCCGGGAACA
CTCGGGGTCA TCCAGCGCCG GCTCCGTGCC ATTGTCCAGG GCAACCGCAA ATTCTTCCGC
GAATCCGGCT CAGCCATACC GGAGATCCTC AAACACCTCC ATAACAACAA GGTCGTCTTG
ATCGACATCC CCCGGATGGG CGAGAGGAGC GAGCTCTTTG TCCTTTCCAT GATAACCCGC
CGGCTCATGC AGGCCCATCG CAAGTCCTCC GAGGAGTTCG GCGTTGAGAG CGAGCCTGCC
GAACAGAAAA AAGTGCTCAT CACCATCGAA GAGGCGCAGA GGGTACTCGG TGCCGGCGGC
TCGTCCACCC AGATCTTCCG GGAATGTGCC ATGGAAGGCC GCAAGTTCGG CGTGGGCCTC
TGCGTGATCA CCCAGCAGCC AAAGAACGTG GACCCCAAGG TGCTTGCCCA GATCAACACA
TTTGTCGTCA TGGGCCTTGG CGACCGGGGC GACCGCGAGA TCATCATGGG CAGTGCCAAG
CAGGATCTTT CCAAAATGGA GATCGAGATC CAGACCCTTG ACCAGGGCGA GGCGATCCTC
TCCACCATCG GCATCCCGTT CCCGGTCAGC ATGAGGATCC ACGAGTACGA GGCGTATATC
ACGGAACTCA ACAGGGAAAA GAAAAAAGAT ATCCGGGAAG GGCTCTCGAC CGGGTTCTCC
TGA
|
|---|
| Protein sequence | MMTLNDIENT DKTKFRLIGK SVLSYRFIVP HDAELFVGDI VKISDEKKEY TFFAKVIDLF
HESNFADKNW DTRPFSELFY GLGEDVFIGV EAVPLGFTDR TGTFRKPRTI PVKFSDVTLP
EAGDFAFLSK VMGDIEVGVM RTGQGVLKEV PVKIHSKVLP QHMGVFATTG MGKSNFMKTF
CASCMKMQQF GLLVVDPHGE YVRGGLSSTG KKTLGLLHYT NGRDGLVVFT ISEGDRKKYS
LSSLWLDYDD FRLSDLNLLY DSSQAQRDVI ETLDEISGSE LVPFFLTANV DTLPDEVKEN
RYTGPHPEIA EKLGSFHPGT LGVIQRRLRA IVQGNRKFFR ESGSAIPEIL KHLHNNKVVL
IDIPRMGERS ELFVLSMITR RLMQAHRKSS EEFGVESEPA EQKKVLITIE EAQRVLGAGG
SSTQIFRECA MEGRKFGVGL CVITQQPKNV DPKVLAQINT FVVMGLGDRG DREIIMGSAK
QDLSKMEIEI QTLDQGEAIL STIGIPFPVS MRIHEYEAYI TELNREKKKD IREGLSTGFS
|
|---|
| |